Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00246 ATGTATGGGAGAAAAGCTTGCCAACTCGTGAAGGAATTTGCAAGTGGAGAAAAAGACCAGCTCACACCCTTTAATAATGATTTGTTTGACCAAGTAATTTCAGAATGCAGCCAACATCACCATGAGCTTCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATGTCCAAACAGCTAGAAATGCTGACCACTATGGAGCCCTCATCCATCTATTTTCTATTGTCCGAAATAAACGTTGTCTAACAGCCTATGTCTATAACCGAACAGAAACTATACGGAACTTGTTATGGAAGATAGGGCCTGTGATTCCTAAAGAAATTGAAGAGAAGCTTAATCACTGGGAGGAAGAGTATTTCAAGAAGCATTCTGCAGCATTGAGAGATTATATGTCAAAAGCACTGGTCGATTTGACAGTGGATATGGTACCACCAAAAGATCCATACATTCAAGTAAGGGTCCTTGAAGACATAAGAGAAGGCATTGTACTTAGTGATAATAAGAGTCCCAATTTTGCCCGACATTCCATGCACTTTCTGAAGCGAACTGATGCAGAGAAATATATCTCCCGGGGTTTAATGGAAGAGCTCGCTGGTTAA 600 0.4083 MYGRKACQLVKEFASGEKDQLTPFNNDLFDQVISECSQHHHELQSLIRKMQEEGLDVQTARNADHYGALIHLFSIVRNKRCLTAYVYNRTETIRNLLWKIGPVIPKEIEEKLNHWEEEYFKKHSAALRDYMSKALVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDNKSPNFARHSMHFLKRTDAEKYISRGLMEELAG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00246 199 CDD GINS_B_Psf1 148 197 - -
Vifa2g00246 199 Gene3D - 1 134 - -
Vifa2g00246 199 CDD GINS_A_psf1 3 133 IPR005339 GO:0000811|GO:0006260
Vifa2g00246 199 Pfam GINS complex protein 48 116 IPR021151 -
Vifa2g00246 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Vifa2g00246 199 PANTHER PARTNER OF SLD5 1 197 IPR005339 GO:0000811|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00246 1 199 Core DNA Replication Machinery Family AT1G80190 67.822 5.52e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00246 K10732 - qsu:112021696 324.709