Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00239 ATGGATGAACTAAATACAATATTTATAAAACTCTCAATCTTGCTAATTGTAATAGTTTCACTTGAGACTAATGTGACTTCAGTAAAAGTTATAATTATCAATGATATACAACCAAATCCATCTCCCACGGGCTCCATACCTCTCTATCTTCATTGTAAATCTAAAGATAATGATCTTGGATTTCACACATTGGGCATATTTGGACAAAGTTACCAATTTTCGTTCAATCCATCATTTCCTGTTATCAAAACTACATTATTCTTCTGTAGTTTTGCATGGCCTGAAAGCTCTTTGCACCATTATCTTGATATTTACGATTATGATAGAGACTCATGCACTGAATGCATATGGAAAATAAATAAAAATGGAGGTTCTATGTTTGGAGTATTTCATCCTTGGAAAAGTATTGGATTAATGGATAGAAACAGTACATCTATGGTGTAA 444 0.3198 MDELNTIFIKLSILLIVIVSLETNVTSVKVIIINDIQPNPSPTGSIPLYLHCKSKDNDLGFHTLGIFGQSYQFSFNPSFPVIKTTLFFCSFAWPESSLHHYLDIYDYDRDSCTECIWKINKNGGSMFGVFHPWKSIGLMDRNSTSMV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00239 147 Pfam Plant self-incompatibility protein S1 30 124 IPR010264 -
Vifa2g00239 147 PANTHER - 29 125 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00239 Vifa-Chr2 33445634 33446077 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00239 30 138 Carbohydrate Esterase AT3G16970 39.344 2.95e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00239 - - cam:105852780 130.568