Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00221 ATGAAGAATTCATCACCACCGTGTTTCACTGATTCATCTTCATTTTCTGTTCCAAACACTTTCATAGGAATTGTTCTTCTCAACTCCAAAATCAGATCTACATCTTCTTGTAACAACAACAACACTCTTCTCTTAACTCGTTCCGAGCTTCTTAGAGACTTTGCAACAAGAGAGTTCAATGCTTTTCTTTGGGTTTTTCTACTTGTTATCACTTTTCTTTTGCTCAGAAGACTCTTCAATGTTTTCACTTTCTTGTACAAAGCTAGAACTATACCTGGACCACCAGCTTCATGTAAGATTGATCAAGTACTAGCAACAGAATTGAACGAAAGATTGATCAAAACGGCTAATCTGAATCCTCTGAAGGTTGCGGACTTTATCATAGATCGAATAGGAAAAATCAGAGTCGGGGGAAGCATTAATTGTGAGTTGGTTTCTCAGCATATGGCTTTCACATTAATGGGAGCCACGTTCTTTGGAGACGGCTTCTTGACATGGCCGAAGGCTGCGATATATGAAGAACTTCTTATGATGGTTTCTAAAGAATCTTGCTTTTGGGCTTCCTATAATGTTACTCCATTTTGGACACGAGGATTTTGGAGGTATCAACGCGCATGTAAAAAGTTAAGAGGCTTAACTGAAGAGATTCTTCATTGCAGAAAGAGTTGCGAGAGTTTAGACCATATAGATCAAAATGTTCGTAGCGAGAGTTCCAACCTAGAAACAAAATCAGCAAATGGTGCCCAATGCCGTTCTAATGATCAGCAAAATTCTAAGGAAGAACTGTACGGTAACATCATGCGTGTGATGCTTCATGGATCTCAAGCTACAGCGGTTTTATTCGCCAATGTATTGACTAATCTTATCAAGCATGTGGAAATACAGGATAAGGTTTATTCGGAGATTAGCATGGTTGGGAGAAACCCTTTGAAATATGAGCATGAAGATGTATATAGGATGCCTTTGCTATTGGCTACAATTTATGAATCTGCGCGTCTTCTCCCCACTGGTACCATGCTTCAGAGGTGTTCTATGAAACAAGACTTGAGATTTGCAACTGGTGTAACCATTCCTGCTGGAGCTGTACTGGTTGTTCCGGTTCAATTGGTACAGAAGGATGACATCAATTGGGGGAAAGATGCAAGTGATTTTAATCCATACCGATTTCTGTCAAATGTTACCGAAGGATCAGAACAACTTGGTTATGGAATCAGCTCGTTTGTACTAAACGATCCAAATGAAAATGCAGCATTTCTTCCTTTTGGATCCGGAACACGATGCTGCGTTGGGCAGAAATTTGTTATCCAAGATGTTGCCACATTGTTGGCATCATTACTCAACAAATACGAGATAAGGTTCAACTCAGGCTCAGATGGTGACTCAGAACCATTGAAAAATCTTCCTCGTCAGTATCATCCTAATTCACAAATACAGTTTGTGAGAAGGGGCCAGTGA 1455 0.4 MKNSSPPCFTDSSSFSVPNTFIGIVLLNSKIRSTSSCNNNNTLLLTRSELLRDFATREFNAFLWVFLLVITFLLLRRLFNVFTFLYKARTIPGPPASCKIDQVLATELNERLIKTANLNPLKVADFIIDRIGKIRVGGSINCELVSQHMAFTLMGATFFGDGFLTWPKAAIYEELLMMVSKESCFWASYNVTPFWTRGFWRYQRACKKLRGLTEEILHCRKSCESLDHIDQNVRSESSNLETKSANGAQCRSNDQQNSKEELYGNIMRVMLHGSQATAVLFANVLTNLIKHVEIQDKVYSEISMVGRNPLKYEHEDVYRMPLLLATIYESARLLPTGTMLQRCSMKQDLRFATGVTIPAGAVLVVPVQLVQKDDINWGKDASDFNPYRFLSNVTEGSEQLGYGISSFVLNDPNENAAFLPFGSGTRCCVGQKFVIQDVATLLASLLNKYEIRFNSGSDGDSEPLKNLPRQYHPNSQIQFVRRGQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00221 484 CDD cytochrome_P450 122 469 - -
Vifa2g00221 484 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00221 484 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00221 484 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00221 484 PRINTS P450 superfamily signature 290 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00221 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Vifa2g00221 484 Pfam Cytochrome P450 141 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00221 484 PANTHER CYTOCHROME P450 FAMILY 4 172 456 - -
Vifa2g00221 484 Gene3D Cytochrome P450 102 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00221 484 SUPERFAMILY Cytochrome P450 123 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g00221 484 MobiDBLite consensus disorder prediction 237 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00221 Vifa-Chr2 27530798 27532857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00221 249 449 Cytochrome P450 AT3G14620 27.723 1.30e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00221 - - psat:127085922 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00221 2 27530798 27532857 Vifa2g00221 2 27530798 27532857 ECH