Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g00211 | ATGCTGTATCTATGGTTACTTACCATCAAATTCATATGTTTCTTTCCCTTTGCTTATACAGAATCACTTGATTATAGATATGCTTGTTTAGATCAGTCTTCTGATCATCCATCTCCGAGATATCAAACCAACCTCAACGATTTACTCTCATTACTGTCATCACATTCTGCTAAAAGCAAAGGTTTCGGTCACAGAACTTCAGGTTTTGATGAAACCAATAAGATTTATGGACTATACTTTTGTCGTGGTGATGCGAACGCCACCCTTTGCAACTCGTGCATTGAAAATTCTAGCAAAATGATAAAACAGGTGTGCCCGAATAATGTTTCTGCTGTTTTTTGGTGTCCGTTTTGTCTTCTGAGGTACTCAAATAAGAATTTCTTCGGCAAATTAGATATAAGACCGAGGATTCCTATGTTTGACGCAACGCAGAATTCTACCGGTGAATTTGATAGTGATGCTAGGATTTTGATGAATGGTTTGATAGATATGGGATCAGAAGCACCTTTAATGTTTGGTACGCATATGTTTAACATAAACGGTACTCAAAGAAGATACGGTTGGGTGCAATGTAGCAGAGATATTACTAGCGAGGAATGTAGAACTTGTTTGAGCAATATGATTCAAGAGGTTGAAAAATGTTGCAAGGAGAAGCGATTTTGGAGAATCTTTTCGCCTAGTTGCGTTGTTATGTATGAAACTCAGCCATTCCTTTTGAATGATGTACAGCATGACGCAGTTCCGCCTCAGAAAGCGCCAGAAAAGGATGAAACAAAGTCGTTGACTCTAAAAATAATCATTCCTGTGATCGGAGTGGTAGCAGTAGCGCTATTGGTTTTTAGTATATACTATTACAGGCGCTTAGAACGAAAAAAAGTTGAAAAAGAGATGAAGAACATTGATGCAATGTTCTCTCAAGATCAGACTAACAATGAGGAGAATGTGAACACGGACCTACCTATGATACCTCTGAGTACGATTCTAAAGTGTACCGATAATTTTTCTGATAAATATAAATTGGGGGAAGGTGGATTTGGAGGTGTCTACAAGGGTGTTTTAGCAGACGGAAGGGAAATTGCTGTCAAAAGGCTTTCGAAAACTTCGGTTCAAGGAGTGGAGGAATTTAAGAATGAAGTAATGTTGATTGCGAAATTGCAGCATCGGAACCTTGTGAGATTGCTGGCTTGCTGCATTGAGAAAAAGGAGAAGCTGGTTATCTATGAATACTTACTGAATTCAAGCCTCGATGTTCAGCTACGCGATATGGTAAAGGCGGCACTGTTGAACTGGAAACAACGATTAAACATTATTAACGGGATTGCTAAAGGGCTTCTGTATCTTCATGAAGACTCTAGACTCAGGGTTATTCATCGAGACTTGAAAGCTAGCAATGTACTGTTAGATCATGAAATGAATCCGAAAATCTCAGACTTTGGACTAGCAAGAACATTTGGAGGAGACCAGGGGGAAGGAAATACAGTTAGAATCGTAGGAACTTACGGATACATGGCTCCAGAATATGCTATCGAAGGCTTGTTTTCAGTGAAATCGGATGTTTTCAGCTTTGGTGTTCTTTTGCTAGAGATCATCAGTGGAAAAAGGAACAACAAATTCTATCTTTCAGAGCACGGCCAAAGTCTTCTCACATATGCATGGAACTTCTGGAGTGAAAGCAAAGGTTTAGAATTGATGGATCCATCGATAGCGAATTCATATGATCCTAGTGAAGTGTTGAAGTGCATACAGATTGGCTTATTGTGTGTGCAAGATAATGCAGCTGATAGACCTACAATGTCAAGTGTTGTTCAAATGCTTGGAAGTGACAATGCTACTCTTCCAAGTCCCATATGTTCAGCTTTTTCTGTTGGAAGGGCTACAAATACAATTGAAGGAGGGACTTCATCAAATGCTTCCGCCCCTGTCCCTGTCAACGATGTCAACGAGATAACCTTATCCGAAATTATGCCTAGGTGA | 1974 | 0.3961 | MLYLWLLTIKFICFFPFAYTESLDYRYACLDQSSDHPSPRYQTNLNDLLSLLSSHSAKSKGFGHRTSGFDETNKIYGLYFCRGDANATLCNSCIENSSKMIKQVCPNNVSAVFWCPFCLLRYSNKNFFGKLDIRPRIPMFDATQNSTGEFDSDARILMNGLIDMGSEAPLMFGTHMFNINGTQRRYGWVQCSRDITSEECRTCLSNMIQEVEKCCKEKRFWRIFSPSCVVMYETQPFLLNDVQHDAVPPQKAPEKDETKSLTLKIIIPVIGVVAVALLVFSIYYYRRLERKKVEKEMKNIDAMFSQDQTNNEENVNTDLPMIPLSTILKCTDNFSDKYKLGEGGFGGVYKGVLADGREIAVKRLSKTSVQGVEEFKNEVMLIAKLQHRNLVRLLACCIEKKEKLVIYEYLLNSSLDVQLRDMVKAALLNWKQRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARTFGGDQGEGNTVRIVGTYGYMAPEYAIEGLFSVKSDVFSFGVLLLEIISGKRNNKFYLSEHGQSLLTYAWNFWSESKGLELMDPSIANSYDPSEVLKCIQIGLLCVQDNAADRPTMSSVVQMLGSDNATLPSPICSAFSVGRATNTIEGGTSSNASAPVPVNDVNEITLSEIMPR | 657 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g00211 | 657 | Gene3D | Phosphorylase Kinase; domain 1 | 294 | 409 | - | - | |
Vifa2g00211 | 657 | Pfam | Salt stress response/antifungal | 36 | 124 | IPR002902 | - | |
Vifa2g00211 | 657 | Pfam | Salt stress response/antifungal | 145 | 234 | IPR002902 | - | |
Vifa2g00211 | 657 | ProSiteProfiles | Protein kinase domain profile. | 334 | 612 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g00211 | 657 | Gene3D | Transferase(Phosphotransferase) domain 1 | 411 | 612 | - | - | |
Vifa2g00211 | 657 | Gene3D | - | 140 | 237 | IPR038408 | - | |
Vifa2g00211 | 657 | Gene3D | - | 24 | 127 | IPR038408 | - | |
Vifa2g00211 | 657 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 38 | 627 | - | - | |
Vifa2g00211 | 657 | ProSiteProfiles | Gnk2-homologous domain profile. | 132 | 237 | IPR002902 | - | |
Vifa2g00211 | 657 | Pfam | Protein tyrosine and serine/threonine kinase | 338 | 605 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa2g00211 | 657 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 138 | 237 | - | - | |
Vifa2g00211 | 657 | SMART | serkin_6 | 334 | 605 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g00211 | 657 | SUPERFAMILY | Protein kinase-like (PK-like) | 317 | 617 | IPR011009 | - | |
Vifa2g00211 | 657 | CDD | STKc_IRAK | 340 | 605 | - | - | |
Vifa2g00211 | 657 | ProSitePatterns | Protein kinases ATP-binding region signature. | 340 | 362 | IPR017441 | GO:0005524 | |
Vifa2g00211 | 657 | ProSiteProfiles | Gnk2-homologous domain profile. | 23 | 127 | IPR002902 | - | |
Vifa2g00211 | 657 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 298 | 409 | - | - | |
Vifa2g00211 | 657 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 410 | 613 | - | - | |
Vifa2g00211 | 657 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 25 | 126 | - | - | |
Vifa2g00211 | 657 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 455 | 467 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g00211 | Vifa-Chr2 | 26637776 | 26640838 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g00211 | 27 | 657 | Receptor kinase-like Gene Family | AT4G05200 | 40.696 | 3.07e-162 | 480 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa2g00211 | PK_Tyr_Ser-Thr | 2.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g00211 | - | - | gmx:100798691 | 881.708 |