Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00154 ATGGAGTGTTGCTTAACTGAATCGGGGAAGATATGTATGGAGAAATTGATAGATAAGGCAATAGCAGAACTACGTCATGTATTTTGCTTCACAAGCACAGCTAATGAATTCAAAGAAAAAAAGACTTGGCTGGAAGAAGAAATAAAAACAATGGAGCAACCTGCTAAAGTGGCAGCAGGAAATGATAAAGATATTGAAGCTGATTATCATTTATGGAAAGAGAAAGCGGAAAAGCTCGTTCAAGAGGACATCCTAACAAAACAAAAATGCTTTTTTGGATTATGTCCTAATTGCATATGGCGATATAAAAAGGGAAAGGAGTTGGCAAATAACATACAAGAGATTAAACAATTAACAGAAAAGAGAGGGACATTTGAAAATATTGAAATCTCTCGCCGTCTTCCGGATGTTGAACGTTACTCATCTAAAGATTACATTTCTTTTCCAATCTCATTTACTCCTGATACAAAAAAAATTCAAGATGATATTGCTGGATCTTTAGGATTGGAATGGGACGACTGTAATGACTCAGACCGACCAAAAAAACTATGGAGCAGATTAACAACCGATGAAAAAGTTCTTCTAATAATGGATGATGTGTGGGATCAAGGCTCACCTCTTGATTTTGATCTAATAGGAATTCCAAAACAAGACAATCACAAAGGTTGCAGAGTTCTTATAACTACACGAAGTAAACAAATATTCAATATAATGGGTTGTGATAAGATGATTGAATTGGATATCTTACCTGAAGAAGAAGCATGGACCATGTTCAAAATGTATGCATGTATAATCGATAATTCTTCCATAAGTTTGATCGCCACGGGACGTGAAATTGCTAAGGAGTGCAAACAATTACCGGTTGCAATTGCAGTTATCGCCAGAAGTTTAAAGGGCCAACAAGATCGTAAGCACAAGTGGGATACTACCTTAAAATTATTGAAGGAAACTGTGTCCATGGACAATGTTGATGAAGAAAAGGTTGGAATTTATAAATGTTTGAAGTCTAGCTATGATGGTATGAAGTATGAAAAAGCCAAGGGATTGTTTCTATTATCTTCAGTATTCCCAGAAGATAAAGAAATCCCTATTGAAATTCTAACTAGACTTGGCATTGGAACGGGCCTTTTTGGGAAGAATTATGGCAACTACAATGATGCTCGAAACCAAGTAGTTGTAGCTAAAGATAAACTCATAGATTCATGTGTTGGCGATTTTGTATCACCAATGTATTTTAGTAGTAATGTGATTTCTAAAGGCCGATGCAATTATGCGTTAAGTTCGGAGACGAGTTAG 1296 0.3588 MECCLTESGKICMEKLIDKAIAELRHVFCFTSTANEFKEKKTWLEEEIKTMEQPAKVAAGNDKDIEADYHLWKEKAEKLVQEDILTKQKCFFGLCPNCIWRYKKGKELANNIQEIKQLTEKRGTFENIEISRRLPDVERYSSKDYISFPISFTPDTKKIQDDIAGSLGLEWDDCNDSDRPKKLWSRLTTDEKVLLIMDDVWDQGSPLDFDLIGIPKQDNHKGCRVLITTRSKQIFNIMGCDKMIELDILPEEEAWTMFKMYACIIDNSSISLIATGREIAKECKQLPVAIAVIARSLKGQQDRKHKWDTTLKLLKETVSMDNVDEEKVGIYKCLKSSYDGMKYEKAKGLFLLSSVFPEDKEIPIEILTRLGIGTGLFGKNYGNYNDARNQVVVAKDKLIDSCVGDFVSPMYFSSNVISKGRCNYALSSETS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00154 431 Gene3D - 248 342 IPR042197 -
Vifa2g00154 431 Gene3D - 136 245 IPR027417 -
Vifa2g00154 431 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 402 - -
Vifa2g00154 431 Pfam NB-ARC domain 149 339 IPR002182 GO:0043531
Vifa2g00154 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00154 Vifa-Chr2 18530840 18532299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00154 189 377 WRKY Transcription Factor Family AT5G45050 26.531 4.47e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00154 - - tpra:123886409 454.907