Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00153 ATGGAATGTTGCTTAACAGAATCGGGGAAGATATGTATGGAGAAATTGATAGATAAGGCAATAGCAGAATTACGTCATGTATTTTGCTTCACAAGCACTGCTAATGAATTCAGAGAAAAAAAGACTTGGCTGGAAGCAGAAATAAAAACAATGGAGCAACATGCTAAAGTGGCAGCAGGAAATGATAAAGATATTGAAGCTGATTATCATTTATGGAAAGAGAAAGCGGAAAAGCTCGTTCAAGAGGACATCCTAACAAAACAAAAATGCTTTTTTGGATTATGTCCTAATTGCATATGGCGATATAAAAAGGGAAAGGAGTTGGCAAATAACATACAAGAGATTAAACAATTAACAGAAAAGAGAGGGACATTTGAAAATATTGAAATCTCTCGCCGTCTTCCGGATGTTGAACGTTACTCATCTAAAGATTACATTTCTTTTCCAAGTAGAGATTCAAAATACAAAGAGCTACTGGATGCATTAAAAAATGACAACAATTATATGATCGTATTGCAAGGGATGGGGGGCACCGGAAAAACTACATTGGCCAAAGAAGTGGGTAAAGAACTAAAGAAGTCTGAACAATTCGCTCATGTAATCGATACAACAGTCTCATTTACTCCTGATACAAAAAAAATTCAAGATGATATTGCTGGATCTTTAGGATTGGAATGGGACGACTGTAATGACTCAGACCGACCAAAAAAACTATGGAGCAGATTAACAACCGATGAAAAAGTTCTTCTAATAATGGATGATGTGTGGGATCAAGGCTCACCTCTTGATTTTGATCTAATAGGAATTCCAAAACAAGACAATCACAAAGGTTGCAGAGTTCTTATAACTACACGAAGTAAACAAATATTCAATATAATGGGTTGTGATAAGATGATTGAATTGGATATCTTACCTGAAGAAGAAGCATGGACCATGTTCAAAATGTATGCATGTATAATTGATAATTCTTCCATAAGTTTGATCGCCACGGGACGTGAAATTGCTAAGGAGTGCAAACAATTACCGGTTGCAATTGCAGTTATCGCCAGAAGTTTAAAGGGCCAACAAGATCGTAAGCACAAGTGGGATACTACCTTAAAATTATTGAAGGAAACTGTGTCCATGGACAATGTTGATGAAGAAAAGGTTGGAATTTATAAATGTTTGAAGTCTAGCTATGATGGTATGAAGTATGAAAAAGCCAAGGGATTGTTTCTCTTATCTTCAGTATTCCCAGAAGATAAAGAAATCCCTATTGAAATTCTAACTAGACTTGGCATTGGAACGGGCCTTTTTGGGAAGAATTATGGCAACTACAATGATGCTCGAAACCAAGTAGTTGTAGCTAAAGATAAACTCATAGATTCATGTTTGTTGGTGGGGGTCGGTGAAGAACATGTAAAAATGCATGATTTGGTTCGTGAAGCGGCTCAATGGATAGCATACAAAGAGATTCGACATGTTAATTTATCGAACAAAGATGAAAAATCATCTGCTCAAAAGGAAAAAAATATGAAATATTTATTTTGTGAAGGGAAGGACATGGATTTGTTTTCCTGGAAGTATGATGGTTCCAAGCTTGAGACTCTAATTCTCGATGTCGAAATGGATGAAGACCGTAAATATATGGAAGCCCCAAATTCTTTCTTTGATAATATTGACCATCTTCAAGTTTTGTACATTTTAGGTCATGACAATCGAACCCTATCATTACCATATTCAATTAGCTCATTGGCAAATATCGTATCTATATTGGTTGATGGAGTTGATTTAGGTGACATCTCTATTTTTGCAAATCTGCAAAGTCTTGAGACTCTTGATTTGGTTAAATGCAAAATCAATGAATTGCCTCGTGAAATTGCAAAATTGGGGAAACTTAAATTGTTAAACTTGGAAAGGTGTGAAATTACAAGGAATGATCCATTTGAGGTTATTGGAAGATGCTCAACACTTGAAGAGTTGTACTTGATAGATAGTTTTAATGATTTTTGTCGAGAAATAACCTTACCTGAGTTGAAAAGGTATCATATCCAGAAAGGGCGGAGAAAGCTTCTTAACTCACTATCAAAATATGTGTCTTTTGATGCAGGTCGTGGTGAATGTTTTTTTTCAAAAGACACATTCAAGTATTGCATGCATACAACAGAGGGTCTTGACTTAAATGGAATTAAGGAGGGATGGAGAAATCTCATGCCTGAGATTGTTCCTATAGATTCAGGTATGAAAGATCTTGTTGAGCTGCGTTTGAGTTCTATCTCACAGTTACAGTGTCTCATTGACTCTGTTGGTTCTCAAGTACCAAACATATTTCCCAATTTGGTTGTACTAAAAGTGAGCACAATGGAAAATTTGGTAGAATTGTTCAATGGCTCCCTTTCTTTTGACTCTTTGAAAAATTTAGAGAAGTTGTCGATAAAGAAGTGTAAAATGTTTCAAAGATTGTTTAATTGCAAGCTAAATCTCTACAATCTAAAGACCGTGACACTTTGTGATTGCCCAATGTTGGTAAACCTCTCTTCACTGTTAACTTCTCGGAACCTGATGCTGCTAGAGAAATTGAAAATAGTTGATTGTGAAGGATTGACAAACATAATAATAGAGGAGGGATCAAAAGAACATGATAATGGTAAGAAGAGTTCTGTCTCAATGTTTCCAAAACTAAAAGTTGTTGAAATTGAAGGATGTCAGCTATTAGAATCAATACTTCCCTTCCTCTCCTCTCAAGACCTTCCAATACTTGAAGCTCTAAGAATAAGAAGATGTCATAAGCTGGAATATATATTTGGCCAGTATGTTGAACTGAGTTCACTCAAAGAAATAGATCTTTGTGAATTACCAAATTTTATGGCCATTTTTCCGAAATCTTCCACTTCAAGAGATGGTTTCAAGGAACAAACACATGTGGACCCAGTCAAATGCAACCTCTTCTCATGGAGTTGTAAATGTTGGCATATGTCAACTACTAAAGTCCCATCGGTTCATGAGGATTCACTGCAGAAGAACTCAACACCATCAGTATCAAATTCACAATGTCTACAGCTATGGGAACGTGCTCAATGCCTTCCAGTACAATCACACATCATGTGCAATATAAAAGAGATTAAGCTATCTGGTTTTTTGAAGATAAAATCTTTGTTTATCTTTTCTATTACTCCAGTAATGTTGGTGGAAACTTTGACAATTTCGAAATGTGATGAATTGGAGTACATAATAGCAGACATTGGAGATGATGAAAGAGGTGGCAATAATTGGGGAAATGCCTTCCCAAAATTGAAACAGCTTTACGTAAATGAATGCATGCAATTGAAATACCTATTTGGGCACTACACTAATGACCATCCAAACCTTCATCTTCCAGCATTACAGTATCTCAAACTTCGCAATCTGCCAAGTTTAGTTGCCATATGTCCCAAACAATATTGCACACCATTTCCACCCTTGGAACAACTTGACATCTCAGAATGCTGCCAGGTTGCTATCAAATCTATTGGTGAATTCATTATTAATCATTCAGATTCAAAATCTCTTGACAATACAATCATCAAGGGATCAAGTTCACACCATATTCAAATATGGGACGGTGCACAATGTTTTCAAGCACGATTGCTTAACATGTGTAATGTAAAAGAAATTACACTTTGTGATATTTCGATGATAAAATCGGTGCTCATCATGTCTATTACTCCAACAATGTTGGTGGAAACTTTGACGATCAAAAACTGTAATGAATTGAAGCACATAATAGTTGACATTGGAGATGATGACAGTGATGGCAATAATTGGTGCAAGGTCTTCCCAAAATTAAAAACTCTCCGCGTTGAAAGTTGCAAGAAATTGGAATACATATTTGGACACTACACTGATGACCATCACAACCACTCTAAGATTCACCTTCATCTTTCGGCATTGCAAAGTCTCACTCTCAATTGCCTACCAAGTTTAGTTGCCATATGTCCCAAACAGTATTGCACAACATTTCCACCTTTTAAAAACCTTCGCCTCTCAGACTGCTCTGAGGTTGCAATCAAATCTATTGGTGAATTCATTATTAATCATTCAGAATCAGAATCTCTGTTAAATACAATCACCAAGGTGAGTGGGAGCATTGAAAATTTTGTTGCTTTAGAAAGTCTCTGGCTACATAAGTCCAAAGCAGAAAATATACTGTGTCTCAATGAAATAGAAGGAGAACCATTGAAGTTAAGGTTGCGATGGATTTACTTATACGATCTGCATTATATGATGTACCTTTTTGTAGGTCCCAAAAATTCTTTTGCCCTACAAAACCTTACAAGAATAACCATCAGGCAATGTGAAATATTGGAAGTAGTTTTCTCTACTTCTATTTTAAGATGCATATCACAATTGCGAGATCTAATTATATTAAATTGCAAACAGTTGAAGCATATCATTGAAGACGACAGGCAGAATCAAAACCTGTCCTTAAGGACTTGTTTTCCAAAACTAAAAACACTTTCCGTAATAAAGTGTCACAAATTGAAATATGTCTTTCTGGCCTCCACATGCAAAGAACTTCTGAGGTTAGAGAATTTGATGATCATAGAATCAGATGAGCTTGAAGAAATATTCAAATGCGAAGGTGACCAGAAAGTCGAGATCCCAAATCTAAATATTCTAGTACTTGACCACCTACCAAGCCTCTTCCACACCCAAGGAATCCTATTTCAGGCGGCAAAAAATCGTTATGTACATAGTTGTCAAAATCTCTCTTTGACTTCAGCCTCTACTCCTTTTGTCATTCATGACATTGATCGGCATTACATAGATCTTTATACAAGGGTTCTGCTTAAGATTCTATTTAAAAAATTACAAAAAGAGTCGACAACTGAAGATACTTGTAATGAAAATTCAAGTGGAGAAACCACAAAAGATGATGTTGCTAGTGTTGGGATTGAAACTGAAGCAGTATTAGGACATGAAACGACATATTCACAGAAGTTGGAGAAAGAACAATCAATGAGTCAACAAGGTCCACTTGGAGAAATCAATACTACCATCAAACCACCTCAGAGTGTTGAAGAAGAAACTGCATTAACAGATGCCAAGATATTAACAACCTCAACTCATTTAGAGTTAATCAGTTCATCACAAGAACAAGATTTTGCTGTTAGAGATTCTCTAGAAACTGTTAAGCTTAATGATGATCAAGGAGATGGAACACATTTGGAAAGAGACGTTGCTGACAGGGTACAAGGCTTGCGTCTAGGCATATAG 5235 0.361 MECCLTESGKICMEKLIDKAIAELRHVFCFTSTANEFREKKTWLEAEIKTMEQHAKVAAGNDKDIEADYHLWKEKAEKLVQEDILTKQKCFFGLCPNCIWRYKKGKELANNIQEIKQLTEKRGTFENIEISRRLPDVERYSSKDYISFPSRDSKYKELLDALKNDNNYMIVLQGMGGTGKTTLAKEVGKELKKSEQFAHVIDTTVSFTPDTKKIQDDIAGSLGLEWDDCNDSDRPKKLWSRLTTDEKVLLIMDDVWDQGSPLDFDLIGIPKQDNHKGCRVLITTRSKQIFNIMGCDKMIELDILPEEEAWTMFKMYACIIDNSSISLIATGREIAKECKQLPVAIAVIARSLKGQQDRKHKWDTTLKLLKETVSMDNVDEEKVGIYKCLKSSYDGMKYEKAKGLFLLSSVFPEDKEIPIEILTRLGIGTGLFGKNYGNYNDARNQVVVAKDKLIDSCLLVGVGEEHVKMHDLVREAAQWIAYKEIRHVNLSNKDEKSSAQKEKNMKYLFCEGKDMDLFSWKYDGSKLETLILDVEMDEDRKYMEAPNSFFDNIDHLQVLYILGHDNRTLSLPYSISSLANIVSILVDGVDLGDISIFANLQSLETLDLVKCKINELPREIAKLGKLKLLNLERCEITRNDPFEVIGRCSTLEELYLIDSFNDFCREITLPELKRYHIQKGRRKLLNSLSKYVSFDAGRGECFFSKDTFKYCMHTTEGLDLNGIKEGWRNLMPEIVPIDSGMKDLVELRLSSISQLQCLIDSVGSQVPNIFPNLVVLKVSTMENLVELFNGSLSFDSLKNLEKLSIKKCKMFQRLFNCKLNLYNLKTVTLCDCPMLVNLSSLLTSRNLMLLEKLKIVDCEGLTNIIIEEGSKEHDNGKKSSVSMFPKLKVVEIEGCQLLESILPFLSSQDLPILEALRIRRCHKLEYIFGQYVELSSLKEIDLCELPNFMAIFPKSSTSRDGFKEQTHVDPVKCNLFSWSCKCWHMSTTKVPSVHEDSLQKNSTPSVSNSQCLQLWERAQCLPVQSHIMCNIKEIKLSGFLKIKSLFIFSITPVMLVETLTISKCDELEYIIADIGDDERGGNNWGNAFPKLKQLYVNECMQLKYLFGHYTNDHPNLHLPALQYLKLRNLPSLVAICPKQYCTPFPPLEQLDISECCQVAIKSIGEFIINHSDSKSLDNTIIKGSSSHHIQIWDGAQCFQARLLNMCNVKEITLCDISMIKSVLIMSITPTMLVETLTIKNCNELKHIIVDIGDDDSDGNNWCKVFPKLKTLRVESCKKLEYIFGHYTDDHHNHSKIHLHLSALQSLTLNCLPSLVAICPKQYCTTFPPFKNLRLSDCSEVAIKSIGEFIINHSESESLLNTITKVSGSIENFVALESLWLHKSKAENILCLNEIEGEPLKLRLRWIYLYDLHYMMYLFVGPKNSFALQNLTRITIRQCEILEVVFSTSILRCISQLRDLIILNCKQLKHIIEDDRQNQNLSLRTCFPKLKTLSVIKCHKLKYVFLASTCKELLRLENLMIIESDELEEIFKCEGDQKVEIPNLNILVLDHLPSLFHTQGILFQAAKNRYVHSCQNLSLTSASTPFVIHDIDRHYIDLYTRVLLKILFKKLQKESTTEDTCNENSSGETTKDDVASVGIETEAVLGHETTYSQKLEKEQSMSQQGPLGEINTTIKPPQSVEEETALTDAKILTTSTHLELISSSQEQDFAVRDSLETVKLNDDQGDGTHLERDVADRVQGLRLGI 1744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00153 1744 MobiDBLite consensus disorder prediction 1616 1636 - -
Vifa2g00153 1744 SUPERFAMILY L domain-like 468 990 - -
Vifa2g00153 1744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 399 IPR027417 -
Vifa2g00153 1744 Gene3D Ribonuclease Inhibitor 1324 1554 IPR032675 -
Vifa2g00153 1744 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1084 1318 - -
Vifa2g00153 1744 MobiDBLite consensus disorder prediction 1617 1631 - -
Vifa2g00153 1744 Gene3D - 303 397 IPR042197 -
Vifa2g00153 1744 Gene3D - 135 300 IPR027417 -
Vifa2g00153 1744 Gene3D Ribonuclease Inhibitor 464 696 IPR032675 -
Vifa2g00153 1744 MobiDBLite consensus disorder prediction 1654 1679 - -
Vifa2g00153 1744 Pfam NB-ARC domain 156 394 IPR002182 GO:0043531
Vifa2g00153 1744 Gene3D Ribonuclease Inhibitor 985 1171 IPR032675 -
Vifa2g00153 1744 Gene3D Ribonuclease Inhibitor 716 874 IPR032675 -
Vifa2g00153 1744 Gene3D Ribonuclease Inhibitor 875 963 IPR032675 -
Vifa2g00153 1744 MobiDBLite consensus disorder prediction 1649 1681 - -
Vifa2g00153 1744 FunFam Probable disease resistance protein At1g61300 132 298 - -
Vifa2g00153 1744 Coils Coil 34 54 - -
Vifa2g00153 1744 PRINTS Disease resistance protein signature 338 352 - -
Vifa2g00153 1744 PRINTS Disease resistance protein signature 598 614 - -
Vifa2g00153 1744 PRINTS Disease resistance protein signature 242 256 - -
Vifa2g00153 1744 PRINTS Disease resistance protein signature 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00153 Vifa-Chr2 18345854 18364673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00153 174 585 WRKY Transcription Factor Family AT5G45050 25.513 4.02e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00153 - - cam:101507086 1938.7