Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00148 ATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTCCCATCTGAAGCGGAGCGTAGATACCAAGAGTACAAATCAGAGTATATTACTACCCAAAAACGAGCTTATTTCAATGCTCATAAAGATGAGGAGTGGTTGAAAGATAAATATCATCCTACAAATTTACTTCCAGTTATTGAAAGGAGGAATGAAAATGCTCGGCGTCTGGCTAAGGATTTTTTGCTTGATTTGCAAAGTGGAACACTGGACATAAATCCAGGTTTAAACTCTGTATCCACTAGATCCGAGCAAGCCAGTGAGCCAAATTCAGAGGAGGAAACGGATGCCGCTGGCAAACGAAGAAGACATGGTAGGGGATCTAATAAGGATAATGATTTCTCTGCTGCTCCAAAAGCTCACCCTGTCAGTTCTGAACCTAGAAGGATACAAGCTGAGATTCAACAGGTTCAGGCTGTTGTTCGGAAGCTTGACAAGGAAAAAGGGATTGAAGATAATATTTTATGCACCAATGATCATAGCAAAAATGGTGATAAGGCGCACAGTGGATCTGTGGGTCCTGTAATAATTATCCGTGGCCTAACATCTATTAAGGGCTTAGAAGGTGTTGAGCTGCTGGACACACTGATAACATATCTTTGGCGGATTCACGGCGTAGATTATTATGGAATGCTTGAGACTAACGATGCCAAGGGTTTTAGGCATGTGAGACCAGAAGGAGGAGCAAGGCATGAAGAAACTGGTAAATTGGGGGCAGAATGGGAGAAAAAGCTTGATTCATTTTGGCAGAGAAGGTTGGAAGGCCAGGATCCCTTGGAAATAAGGTCTGCAAAGGAGAAGATAGATGCTGCAGCAGCCGACATGTTGGATCCATATGTTAGAAAGATTAGGGATGAAAAGTATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACAAAGCTTTTTCATGCAGTTGAATTTGTGTACAAACATCTCAAGCTAAAACATCCAGAGCTTGTGTTGGAAGTAACATCAAAATTGCGTGAAGATCTTTATTTTCAAAATTACATGAATGATCCGGATGCTCCTGGTGGAACCCCTGTCATGCAGCAATCTCAGAAGGACAGGCCTTTAAAGCGTAGATTACTGGATGGCCGATTGAAAGATGATCGTGGGAATCAGCGAGACCAGGATCGAACAAATGGAGATAGACCTGACAGTTCTCCATCCCGTGAAAGGCGGTTGGGTGGCCGTGATGAAACTATGTTTGATGCATATGGAGGGCCTGCTGTATCTCAATTCTCCTCAGATATGCACCCTCCTCCTTCAGTTTTGATGCCAGTACCTGGTGCCGGGCCTCTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCGATGCAGATGTTTAGGGATCAAGGACCATCTTCATTTGATACCTCAGGGATGACCATGCGTTCTGGTCCTCAAATAGGGGGACAGACCTCTATGATTGCTGTTCCTCCCGCCTTTAGACCTGATCCTCGACGGATGCGGAGTTATCAAGATTTGGATGCCCCTGAAGAAGAAGTTACTGTTATTGATTATCGGAGTTTGTAA 1581 0.4428 MSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNAHKDEEWLKDKYHPTNLLPVIERRNENARRLAKDFLLDLQSGTLDINPGLNSVSTRSEQASEPNSEEETDAAGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQAEIQQVQAVVRKLDKEKGIEDNILCTNDHSKNGDKAHSGSVGPVIIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETNDAKGFRHVRPEGGARHEETGKLGAEWEKKLDSFWQRRLEGQDPLEIRSAKEKIDAAAADMLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAVEFVYKHLKLKHPELVLEVTSKLREDLYFQNYMNDPDAPGGTPVMQQSQKDRPLKRRLLDGRLKDDRGNQRDQDRTNGDRPDSSPSRERRLGGRDETMFDAYGGPAVSQFSSDMHPPPSVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSSFDTSGMTMRSGPQIGGQTSMIAVPPAFRPDPRRMRSYQDLDAPEEEVTVIDYRSL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00148 526 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 524 IPR039727 GO:0006397
Vifa2g00148 526 MobiDBLite consensus disorder prediction 369 415 - -
Vifa2g00148 526 Pfam SERRATE/Ars2, N-terminal domain 4 85 IPR021933 -
Vifa2g00148 526 MobiDBLite consensus disorder prediction 483 511 - -
Vifa2g00148 526 ProSitePatterns Zinc finger C2H2 type domain signature. 308 331 IPR013087 -
Vifa2g00148 526 MobiDBLite consensus disorder prediction 101 124 - -
Vifa2g00148 526 MobiDBLite consensus disorder prediction 86 143 - -
Vifa2g00148 526 Pfam Arsenite-resistance protein 2 247 423 IPR007042 -
Vifa2g00148 526 MobiDBLite consensus disorder prediction 86 100 - -
Vifa2g00148 526 MobiDBLite consensus disorder prediction 353 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00148 Vifa-Chr2 17098141 17100930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00148 1 526 C2H2 Transcription Factor Family AT2G27100 64.815 0.0 655