Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00147 ATGGCAGAGGTAATTAACTTACCTCCCGAATCTCACGACCGATCTCCCACCACTGCTCCTCCTCCGAATCCCCTGCCTCCTCATCCTCCTCCAGCCGACGACGATCTCCCTCCTCCACCTCTCCCTCGTCGGAGAGACTTTCGCGACGACAGGGATTTCGATCGCCGTCCCTTCCGCGGCGGCCGAGGCGGTGGACGAGGTGGTTTCTACAACCGTGACAAACGACGTCGCAGCCCTAGCCCTAATTACCGTGACCGCCGCTATTCTCCTCCTCAGCAGTCTCGACGTTCGCCTCCTCCGTTTAAGAGATCCAGAAGGGGGAGCCCGCATAGACCTAACGACAGATTTGGCTATGATCACTTTGGTGGCGGCTATGAAAGGGGAGTGGGCGGAAGGGGTGGTTATGCAGATGATAGACCTGTTGGCAGGTTTCCACATCGATCTGCAGGGGGATATCAAAACGGAATTTCTGATCTAGATGCCGCTCGTGGTTATGCAGATGGGCCAAGTGGAGGTGCTCGAAGATCCAAACAAATGCAGTGTGAGTGTAAGGAGGAACAAGGTGCTGCAAAATATTGGAGGACAGTTGTTATCTAA 597 0.5494 MAEVINLPPESHDRSPTTAPPPNPLPPHPPPADDDLPPPPLPRRRDFRDDRDFDRRPFRGGRGGGRGGFYNRDKRRRSPSPNYRDRRYSPPQQSRRSPPPFKRSRRGSPHRPNDRFGYDHFGGGYERGVGGRGGYADDRPVGRFPHRSAGGYQNGISDLDAARGYADGPSGGARRSKQMQCECKEEQGAAKYWRTVVI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00147 198 MobiDBLite consensus disorder prediction 38 61 - -
Vifa2g00147 198 MobiDBLite consensus disorder prediction 68 83 - -
Vifa2g00147 198 MobiDBLite consensus disorder prediction 14 37 - -
Vifa2g00147 198 MobiDBLite consensus disorder prediction 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00147 Vifa-Chr2 17090142 17094649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g00147 83 172 C2H2 Transcription Factor Family AT2G27100 50.485 3.73e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00147 K27103 - gmx:100811300 125.561