Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g00066 ATGGACATTGAAAGTGAGATAGTGAACCCTAGTAACACTAACACACTCAAAATTAAGATTGCAACAAGTAGTAGCAAAAAACAAAGTGAAGATAGTTCAAATTTACCTTCACCAAACACAAAAACTTCCATAGAATCATCATCATCACCTTATGATCAATCTCCTCTTGTTTCACCACCTTCATCAGCATTTGTTTCAGCATTGCAATCTCCATATATATCTCCAAGAGCCACAGTTCCAAACCCTAATAGTACTATTACTACTACAGATCCTTCAACTCCAGAAGATGTTCCTAGTAGTTCCTACACTCCTCCTTCTGATCTTTATGAGTTTTCTGATGACACTTCTGATACAAAGCTCAAATTTATGACATGTGTTCCTGAAACAGTTCCTCCAAGAATCTCATTCTCATTTCCAGTTCCTAGGGTTTCCTTTGGGAAAAACTCTGTCTCCCCTGCTGCTAAAAATTCCAAACTTGGAAGCTGTGATGTCTACATTGGATTCCATGGACAAAATCCGAATCTTATTCGCTTCTGCAAGTGGCTTAAATCTGAGCTTGAGCTTCAAGGGATTGATTGTTTACTTGCTGATAGGTCAAAGTATTCAGATATTCAAAGCCATGAGATTGCTGATAGAGTCATTTGCTCGGTCGCATTCGGTTTAGTGATCGTCACAAGTTCGAGTTTCCTCAATCGGTTAAGCATGGAAGAGGTGAGATTCTTCGCTCAAAAGAAGAATTTGATTCCTATATTCTTTGACACATTACCTGCTGAAATTATGTCACTTGTTAATTGCAATTCAATTGATAAAGAATGTAAAGAAGCGGTCGATGGACTCGTGAAGTGCAATGAGTTCTGTTTAGAAGCTAATGATGGTAATTTGAGAAGTTGCATATTGAGAGTTTTGAGTATTTTAAGAGCAAGACTTGGCAGGAAGAATGTTGGTCCTAAGGATAATCATAATATGCTAGGGGTTGAGAATTTATTACCTTTTCCAAGGAATGCATATTTTGTGGGAAGAGAGAAAGAGGTTATGGAGATTGAAGGTTTTCTTTTCGGAAACCGGAGTTTTTGTACGGAACAACAAGTTCAAGATCATTGCAGAGCAAGTGGTAGTGGACAAAGTGAAGGCCTTGCAGATGAAGAAAGTGAAACTACGGTTGGAAAAGGCGGTGGTGGAAGGTATATAAGCTTAGAGATAGGGAGGAACAAAGAACCGAATTTAGAAGCATGGATTGAACAACCAATCATAGGAAACAATTCATTGAAGAGGTTGAAGAACAAGAAGTCGAAAAACGGAAGCTACAATAAGAGTTTATGTAGTATTAGCAGTGTGATTTGCATTAGTGGAGTCTCTGGTATTGGAAAATCTGAATTGGCCTTAGAATTCGCTCATAGATATTACCAAAGGTACAAGATGGTTTTGTGGATTGGTGGTGAAGCTAGGAATCTTAGGCAGAACATATTGAACTTGTCCAGAAATTTCGGTTTAGACGTTGGTGCCGATTCCGAGACAGAAAGAGGTAGAATTCGAAGCTTTGAGGAGCAAGAATTAGAAGCGTTCAAGAGAATCAAGAGGGAACTTTTCAGTGACACGCCTTATTTGTTGATAATTGATAATCTTGAGACTGAAGAGGAATGGTGGGAAGGGAAAGATTTGTATAATTTGATACCGAAAAACAACACGGGAGGGACTCATGTCATTATCACTACTAAGCTTTCCAAGGTAAAGAACTATGATGCAATTCATCTCCCTCCATTGCCATTATCTGATGCGATGATTTTGTTAAGAGGAAGAAAAAGAAAAGAGTATTCGAAGGATGAAGTAAATTTCCTTGAAAAATTCTACGAGAAACTTGGTAGATTAAGCTTTGGTTTGACGATGATTGGTTCATTGTTGTCCGAACTTGCAATTAGTCCTTCTGCACTCTTCGAGTCCATTAACCAAGTTCCGCTGAATGAAGATTCAAGCTCTGGTTATATGAGTGCTGCACAAGAACAATGGTGCAAGAACAATCTTTTCGTCATGAAGACTTTGCTTTTTTGTTTGGAAACTTTGGAGAAAACAAAAGCAAAAGGGAATGTTTTTGCTATAAGAATGCTTCTTGTTGGTGGTTGGTTTTCTCCTGCTCCAATTTCAGTCAGTTTGTTAATCAATGCAGCGAAGAGTGTTTCCACAAGTGAAAATCATCTCAAGAAGTGGACAAACTGTACAAGCCTGACATCCAGTTGTTTATCGCCGCGCACGTGGAAAGACGAAGAAGACTCGGCTACGCTTCTTGTGAAATTTGGACTAGCAAAAAGGACTAATCTACATGATGATGGAATTTGGCTTCATTTCCATTCCATAACACAAACATTTGCTAGAAGAAAAGGCGGGTTGAAATACGCAAAGGCTGCGATTCAAGGAGTAAGAAAAATTAGCAACCATGAAATCTCAGATCATTTATGGGAATCAGCTTTTCTTGTTTTTGGATTCAAATCCGAGCCACCGGTCGTGGAGCTAAAGGCAACCGACATGGTTATGTACATCAAAAGAACGGCTCTACCGCTCGCGATTCAAGCCTTCACCTTGTTTTCGAGATGCAATTCGTCTTTAGAACTCTTGAAAGTTTGCACCAATGCACTTGAAGAAGTTGAGAAATCATTTGTGACTCAAATACAAGATTGGTCTCATGACTCAATTTGTTGGAAAAAAAGGTTGCAAAGAAGACAAAAAGTTGATGAATATGTGTGGCAAGATGTTACCTTATTGAAGGCAACATTGCTTGAGACTAGAGCTAAGTTGTTAGCTAGAGGAGGACAGTTAGATAATGGTAAGGAACTTTGTAGAACATGTATTAGTATTAGAACTGTGATGCTTGGACATAACCATGCACAAACCTTAGTTGCTCAAGAGACACTAGCTAGGTTGGTGAGAATGAGGAGTAAGATATGA 2937 0.3878 MDIESEIVNPSNTNTLKIKIATSSSKKQSEDSSNLPSPNTKTSIESSSSPYDQSPLVSPPSSAFVSALQSPYISPRATVPNPNSTITTTDPSTPEDVPSSSYTPPSDLYEFSDDTSDTKLKFMTCVPETVPPRISFSFPVPRVSFGKNSVSPAAKNSKLGSCDVYIGFHGQNPNLIRFCKWLKSELELQGIDCLLADRSKYSDIQSHEIADRVICSVAFGLVIVTSSSFLNRLSMEEVRFFAQKKNLIPIFFDTLPAEIMSLVNCNSIDKECKEAVDGLVKCNEFCLEANDGNLRSCILRVLSILRARLGRKNVGPKDNHNMLGVENLLPFPRNAYFVGREKEVMEIEGFLFGNRSFCTEQQVQDHCRASGSGQSEGLADEESETTVGKGGGGRYISLEIGRNKEPNLEAWIEQPIIGNNSLKRLKNKKSKNGSYNKSLCSISSVICISGVSGIGKSELALEFAHRYYQRYKMVLWIGGEARNLRQNILNLSRNFGLDVGADSETERGRIRSFEEQELEAFKRIKRELFSDTPYLLIIDNLETEEEWWEGKDLYNLIPKNNTGGTHVIITTKLSKVKNYDAIHLPPLPLSDAMILLRGRKRKEYSKDEVNFLEKFYEKLGRLSFGLTMIGSLLSELAISPSALFESINQVPLNEDSSSGYMSAAQEQWCKNNLFVMKTLLFCLETLEKTKAKGNVFAIRMLLVGGWFSPAPISVSLLINAAKSVSTSENHLKKWTNCTSLTSSCLSPRTWKDEEDSATLLVKFGLAKRTNLHDDGIWLHFHSITQTFARRKGGLKYAKAAIQGVRKISNHEISDHLWESAFLVFGFKSEPPVVELKATDMVMYIKRTALPLAIQAFTLFSRCNSSLELLKVCTNALEEVEKSFVTQIQDWSHDSICWKKRLQRRQKVDEYVWQDVTLLKATLLETRAKLLARGGQLDNGKELCRTCISIRTVMLGHNHAQTLVAQETLARLVRMRSKI 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g00066 978 Gene3D - 419 582 IPR027417 -
Vifa2g00066 978 PANTHER DNA REPAIR PROTEIN RADA 45 973 - -
Vifa2g00066 978 MobiDBLite consensus disorder prediction 368 390 - -
Vifa2g00066 978 SUPERFAMILY Toll/Interleukin receptor TIR domain 162 256 IPR035897 -
Vifa2g00066 978 MobiDBLite consensus disorder prediction 1 107 - -
Vifa2g00066 978 SMART AAA_5 442 608 IPR003593 GO:0016887
Vifa2g00066 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 328 640 IPR027417 -
Vifa2g00066 978 Gene3D - 142 276 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g00066 Vifa-Chr2 5233369 5236305 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g00066 - - gmx:100780810 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g00066 2 5233369 5236305 Vifa2g00066 2 5233369 5236305 ECH