Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10995 ATGTCTCCTCTTACAAGATATTTTTTATTTCTATGTGTCCTGATGTGTCTATTAATGGACAATGCTCTAGGAGTGCAAGTGAGAGTTTCAAACGATTTAGGAAATAATGTGGACTTAACCGTTCATTGTAAATCTGGAGATGATGATCTAGGCCCACATCTTATTCGCCCTAAGGGAAGTTATAGCTTTAGCTTTAACACTAATTTTTTTGGAGGAACATTATTCTTCTGTTCGTTTAAATGGGATAAAAATATCCGTCATTTTGATATATACAAACAAAGAAGAGATTATAGGAAAGGTGATTATTTCGACTATTTTGTAAAACAAGCTGGACCATGTTTGGCTAGTACAACTGGTCCTGTTTATTTTTTGAAAAGAATAACACATGCTCCTATTTGTTATTCATGGAATGCTTAA 417 0.3333 MSPLTRYFLFLCVLMCLLMDNALGVQVRVSNDLGNNVDLTVHCKSGDDDLGPHLIRPKGSYSFSFNTNFFGGTLFFCSFKWDKNIRHFDIYKQRRDYRKGDYFDYFVKQAGPCLASTTGPVYFLKRITHAPICYSWNA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10995 138 PANTHER - 26 116 IPR010264 -
Vifa1g10995 138 Pfam Plant self-incompatibility protein S1 26 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10995 Vifa-Chr1 1852419513 1852419929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10995 25 138 Carbohydrate Esterase AT3G16970 37.288 2.73e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10995 - - mtr:25483709 100.908