Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10912 ATGGAGCATGTTATGCAGCAAGGTCGTTCTCTTGCTGAGACGCCTACATATTCAGTTGCATCTGTTGTTACTGTCATGGTTTTTGTTTGCTTCTTGGTCGAGCGTTCTATATACCGTTTTGGAAAGTGGTTGAAGAAGACAAGAAGGAAGGCGCTTTTTGCTTCACTCGAGAAAATTAAAGAAGAGCTGATGCTGCTTGGGCTTATCTCGTTGTTGTTGGCACAAAGTGCGAGATGGATCTCTGAAATTTGTGTAAATTCAGCCCTTTTCAGCAGTCGATTTTATACGTGTGCTGAACAAGACATTGGCGTGATTGAGAATGTCGTGATTAAAAACTCTTCCTCTTTCTCTGATGAAACTAGTATTCCAAAGGGGCTAAATAGGGTTGCACTTCATCAATGTGGAGAGGGTCATGAACCATTTGTTTCATATGAGGGTCTTGAGCAGCTTCACCGGTTTTTATTTGTTCTCGGGATCACTCATGTTCTGTATAGTGTTGTGGCTGTTGGTTTAGCGATGAGCAAGATCTATAGTTGGTGCAGATGGGAAAATCAGGCTACAATGGCGATTATCGATGGAAACGTGCCAGGAAAGAAAAACAAGGTGATGAGGCGGCAAACAACGTTTGTTTTCCATCACACGTCTCATCCGTGGAGCAGGAATCCAATACTAATATGGATGCTATGTTTTCTGCGTCAGTTTAGAAGTTCTATACAAAAATCAGATTACCTTGCACTCCGTCTGGGTTTCATTACTGAACATAAATTGCCATTATCATATGATTTTCATAAATATATGGTTCGAAGCATGGAAGATGAATTTCACGGCATTCTAGGAATAAGCTGCCCGCTCTGGATTTATACTATCGTCTGCATCTTCGTAAACATCCATGGTCTCAATATATACTTCTGGTTCTCCTTTATACCTGCAATTCTTGTGATGGTAATAGGTACAAAACTTCAACATGTTGTGTCCACTTTAGCACTTGAAGTCTGGCAGCACCAGGGTCCATCTGCCAGTACACAAGTAAAGCCGCGAGACGCACTTTTTTGGTTCAATAAACCAGATATTTTGTTATGGCTGATACAATTTGTGATATTTCAGAATGCTTTTGAAATGGCTTCATTCATTTGGACATTGTGGGGATTTAAACAACAGTCATGCTTCATGAGACATCATTATATGATCGTCATTCGGTTGACATCTGGAATTCTTGTTCAATTCTGGTGTAGCTATATGACAGTACCCCTCAATATAATAGTTTCACAGATGGGATCGCGGTGTAAGAAGGCGCTAGTGACCGAAAGTGTAAGAGAGTCTTTACACAGTTGGTGTAAGAGAGTAAAACAGAAGTCTAGGCATGATCATTCTCTTCGCTCGCATACAGCCAGATCAATATGTTCCCTAGAATCAACAATCGATGAGAGGGACGAGATAACAGTTGTATCCGGGACGCTAACTCGAACAACTTCCTTAGACTTAGAGTCTTTGAATCAGATGACAGTAACTTCAGTAGACCAGCTGAATTTTATGACTTCTAACAACCTCCATAATTCGCATTACAACGGTGCTGGCGACAGAGACGAGACTAAAGTCGAAACTCTCCTAGATTTGTTTCACAAAACATGA 1629 0.4095 MEHVMQQGRSLAETPTYSVASVVTVMVFVCFLVERSIYRFGKWLKKTRRKALFASLEKIKEELMLLGLISLLLAQSARWISEICVNSALFSSRFYTCAEQDIGVIENVVIKNSSSFSDETSIPKGLNRVALHQCGEGHEPFVSYEGLEQLHRFLFVLGITHVLYSVVAVGLAMSKIYSWCRWENQATMAIIDGNVPGKKNKVMRRQTTFVFHHTSHPWSRNPILIWMLCFLRQFRSSIQKSDYLALRLGFITEHKLPLSYDFHKYMVRSMEDEFHGILGISCPLWIYTIVCIFVNIHGLNIYFWFSFIPAILVMVIGTKLQHVVSTLALEVWQHQGPSASTQVKPRDALFWFNKPDILLWLIQFVIFQNAFEMASFIWTLWGFKQQSCFMRHHYMIVIRLTSGILVQFWCSYMTVPLNIIVSQMGSRCKKALVTESVRESLHSWCKRVKQKSRHDHSLRSHTARSICSLESTIDERDEITVVSGTLTRTTSLDLESLNQMTVTSVDQLNFMTSNNLHNSHYNGAGDRDETKVETLLDLFHKT 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10912 542 PANTHER MLO-LIKE PROTEIN 1 5 487 IPR004326 GO:0006952|GO:0016020
Vifa1g10912 542 Pfam Mlo family 9 468 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10912 Vifa-Chr1 1841031390 1841034562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10912 1 507 MLO family AT1G11000 70.138 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10912 K08472 - gmx:100801624 859.366