Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10865 ATGGGGAAAATTGGAAATCAAGATGTGCAACAAGAAGAACAGAGGGAGAACGACGGTGAAGGCTGTTCACGGTGTTCGGCGGTGCTGAGATTATTCAGTTTCAAGTGTTTTTTCATTCTCCTTTTCAGTTTATCGGCTTTTCTTTCCGGAATCTTCTGGGTTCTTCCTAAACACAATTCAACTCAATTGAGCTTTGATGCTAAAGATGTAATTAAGCACAGTGCTACTGTTCAGGCATCGTTCAGGCTGGAAAAACCAGTTTCACAGCTTATTCCATACATTGAAAGATTACAAGATGATATATTTGGTGAAATAGCTCTGCCAAATACAAAGGTGGCTATCCTATCCATACACCAAAGTGTTGCACCTAGCTTGTCTGATGTGCAATCCAATCTGACTTTCACAACATCAGTATTTGGAAACGCATCTTTGTTTGAGATCTTGAAGATTCCTGGCGGGTTAACTGTAAAACCAGTGCAGTCTGCTTCTATTTGGCAGATACCTGAGATTCTGTTTAATTTTACTCTTAATAATTCAATATCTGAAGTCCTGGATAAGTTTGACGACTTTGAGGAAGAATTGAAGTTTGGGTTGCATCTGAAGTCGGACGAGAATGTCTATGTGCACATAACAAATGCACGTGGCTCAACAGTAGCTCGTCCTGTGGTAGTGCAGGCATCAGTCATGCGAGGGTTTGAGAGCCTTTTGCCACAAAGATTGAAACAAATAGCTCAAACAATAAGACGCTCTGCTAGAAAAAATCTTGGCCTTAATAACTTGGTTTTTGGCAAAGTCAAAGAAATCAGGTTATCTTCTTTATTAAAGGATACACTACATGCTCACCCACCTGCTCCTGCCCCATCCCCACAGTTAGTTGATCATTCTGAGCCATTAATTTCACCATACCATGCTCCTTCTCCTTCTCCAATATCCCCAGAAACTTCTGAGAAACCTCCTTGTTTTGACTGTGAAGTATTCTCACCTTCACCTTCCATTATGACCGAGCATCCTGCAGATCCCTGTCCATACAGTTGCTTCAAGCTCCTCCAAGATAGGGAGAAATCTAAAAAGTTGGTGTCTCGCGTACTTGCTCCGCTCTCTCAATCTTCAGCAGGCGGCGGTTTCCACTCAGAAATCTTGCTAATGGGATTTTGTTTGCTATTAGTATCTTTTGTTCTTATCAATGATATTATATTTCAATGA 1203 0.4106 MGKIGNQDVQQEEQRENDGEGCSRCSAVLRLFSFKCFFILLFSLSAFLSGIFWVLPKHNSTQLSFDAKDVIKHSATVQASFRLEKPVSQLIPYIERLQDDIFGEIALPNTKVAILSIHQSVAPSLSDVQSNLTFTTSVFGNASLFEILKIPGGLTVKPVQSASIWQIPEILFNFTLNNSISEVLDKFDDFEEELKFGLHLKSDENVYVHITNARGSTVARPVVVQASVMRGFESLLPQRLKQIAQTIRRSARKNLGLNNLVFGKVKEIRLSSLLKDTLHAHPPAPAPSPQLVDHSEPLISPYHAPSPSPISPETSEKPPCFDCEVFSPSPSIMTEHPADPCPYSCFKLLQDREKSKKLVSRVLAPLSQSSAGGGFHSEILLMGFCLLLVSFVLINDIIFQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10865 400 PANTHER F20B24.21 129 341 - -
Vifa1g10865 400 MobiDBLite consensus disorder prediction 281 315 - -
Vifa1g10865 400 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10865 Vifa-Chr1 1829558550 1829562143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10865 22 276 C3H Transcription Factor Family AT3G10810 39.024 1.93e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10865 - - gmx:100788006 490.345