Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10846 ATGAAGAATCAGAACCAAACAGTTATTAACAGTAACATCATCTCCCACAACATAAAACTTGAAACATTAAACACATTCCTCATCAAACCCTCCAAACCAACACCACCAAACCTTAAAATATTCAAACTCTCTTTACTTGATCAACTCTCACCCAACATCCATGGCAACTCCACCTTCTTCTTCCCAAACAAAAACTCCTCTCATTCTCATAGCTCCTTCTCTCATTACTCCAAACTCCTCCAAACCTCACTCTCCCAAACATTATCCCTATTTTACCCTTTCGCCGGTCGTCTCCAAGACTCCACCGACACCCGCACTGGCACCACCATTCACTGCAACGACGATGGCGTTTTATTCATCGAGTCTCAAACTACCACCACTCTCTCACAACTCCTCACCAACCCCGATTTCAACACCCTCGAATGCTTCCTCCCAATTCCAACCACTGAAAACCAAAACATGCTGTTATTAGTCCGTTTCACTTTGTTCAGCTGCGGTTCCACCGCACTTACCATATCCCTCACACACAAGATCAGTGACTTTAACACCTTCATGACGTTTCTCAACACTTGGACCGCCGTATGCGCCGCCACACCGGTTCCACTACCTGACTTAACCACCGCCTCCACTCTCTTTCCTCCTAGAGAACTCCCCGAGATGTCCGCTTCCTTTACACCTTCATCAAAAAAATTCACTTCTAGAAGATTTATTTTTCATGCATGCAAAATAGAAGAACTAAAGAGGGAAATCAAAAGGGAAATCGAGTTTTTCCCTTCGAGAGTCGAGGTTGTTCTAGCTCTCATTTGGAGATGTGCTCTTTCAGCTTCTCGTTCCAAAACGCGGACGTTTAAGCGTTCGGTTTTGTTTCAAGCTGTAAACCTCCGTCCACGCATGGACCCCGCTGTACCAGAAACAGCAGTTGGGAACTTTGTGTGGTCGTTTGTGGTGACAGTTGAAGAAGAATGCCACATGGCATTACACGAGACGGTGAAGAGAATGAGAAATGGTATGAAAGAGTTTATAGAGAATGAAGCAAAGACTTTTAAGGAGGAAGGTGGGTTTAAAGTGGTGATGGAGAGTTTCAAAGATAGGGTTGAGACTTTGATTGGGAATGAGAATGAGGAGAGTGTGCCAATTTACAAATGTTCTAGTTGGTGTAAATTTCCAGTGCTTGAATTTGATTTTGGGTGGGGGAAACCAGTGTGGAATTGTTGTGTGAATAAGTTGGTGAGTAATACAATTGCTTTGATGGATACAAAAGATGGTGATGGAGTTGAAGCTTTTGTTACTCTTGATGAGGATGATATGGAGTTATTTAAACAAGATGAAGAGCTTCTGCACTATGCTGTGCTTAATCCTAGAATCATCATTTGA 1374 0.4309 MKNQNQTVINSNIISHNIKLETLNTFLIKPSKPTPPNLKIFKLSLLDQLSPNIHGNSTFFFPNKNSSHSHSSFSHYSKLLQTSLSQTLSLFYPFAGRLQDSTDTRTGTTIHCNDDGVLFIESQTTTTLSQLLTNPDFNTLECFLPIPTTENQNMLLLVRFTLFSCGSTALTISLTHKISDFNTFMTFLNTWTAVCAATPVPLPDLTTASTLFPPRELPEMSASFTPSSKKFTSRRFIFHACKIEELKREIKREIEFFPSRVEVVLALIWRCALSASRSKTRTFKRSVLFQAVNLRPRMDPAVPETAVGNFVWSFVVTVEEECHMALHETVKRMRNGMKEFIENEAKTFKEEGGFKVVMESFKDRVETLIGNENEESVPIYKCSSWCKFPVLEFDFGWGKPVWNCCVNKLVSNTIALMDTKDGDGVEAFVTLDEDDMELFKQDEELLHYAVLNPRIII 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10846 457 Pfam Transferase family 19 445 - -
Vifa1g10846 457 Gene3D - 17 221 IPR023213 -
Vifa1g10846 457 PANTHER F21J9.9 22 449 - -
Vifa1g10846 457 Gene3D - 228 449 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10846 Vifa-Chr1 1825505469 1825506842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10846 18 441 Monolignol Biosynthesis Gene Families AT5G48930 22.345 4.71e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10846 - - tpra:123896825 529.635