Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10832 ATGGATCATGAAGCAGATGCTAACAGAACTGATTTGATGACAATAACTCGTTTTGTTCTCAATGAACAATCTAAGTTTCCTGAATCACGTGGTGATTTCACCATCCTCATTAGTCACATTGTTCTTGGCTGCAAATTCGTTTGCTCTTCTGTCAACAAGGCAGGATTGGCAAAACTCCTAGGACTTGCTGGAGACACCAATATTCAAGGTGAAGAACAAAAGAAATTGGATGTGATTTCTAATGAAGTATTTGTGAAAGCCTTAATCAGCAGTGGAAGAACATGCCTTCTTGTTTCTGAAGAGAATGAAGATGCTATCCTTGTCCCACCATCACAACGTGGCAAATACATTGTTGTGTTTGATCCTTTGGATGGATCCTCAAACATTGATTGTGGAGTTTCTATTGGAACTATTTTTGGTATTTACATGGTGAAGGATATAAATAATGTTACCGTTCAAGATGCATTGCAACCTGGTAGCAAATTAGTAGCAGCTGGTTATTGCATGTATGGAAGCTCTTGCACGTTTGTGCTTAGCACAGGATATGGAGTGAATGGTTTCACACTTGATCCTTCCCTTGGAGAGTTCATATTGACTCATCCAAACATCAAGGTACCGAAGAAAGGAAAGATTTATTCGGTGAATGAAGGAAATGCGAAAAACTGGGATGAACCTACCACCAAATATGTAGCAAATTGCAAGTTTCCACAAGATGGTTCATCACCAAAATCTCTTAGGTACATTGGCAGTATGGTAGCTGATATCCATAGAACATTGCTATATGGTGGTACCTTCATGTACCCTGCTGATACCAAAAATCCAAATGGAAAACTAAGGGTTTTGTATGAAGTGTTTCCAATGTCATATTTGATGGAACAAGCAGGAGGTCAAGCTTTCACAGGAAAACAAAGGGCACTTGACTTAGTTCCAGAGAAAATACATGATAGATCACCAATATTTCTTGGAAGCTATGATGAAATTGAGAAAATCAAAGAGCTCTATGCAGAACTTTAG 1014 0.3866 MDHEADANRTDLMTITRFVLNEQSKFPESRGDFTILISHIVLGCKFVCSSVNKAGLAKLLGLAGDTNIQGEEQKKLDVISNEVFVKALISSGRTCLLVSEENEDAILVPPSQRGKYIVVFDPLDGSSNIDCGVSIGTIFGIYMVKDINNVTVQDALQPGSKLVAAGYCMYGSSCTFVLSTGYGVNGFTLDPSLGEFILTHPNIKVPKKGKIYSVNEGNAKNWDEPTTKYVANCKFPQDGSSPKSLRYIGSMVADIHRTLLYGGTFMYPADTKNPNGKLRVLYEVFPMSYLMEQAGGQAFTGKQRALDLVPEKIHDRSPIFLGSYDEIEKIKELYAEL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10832 337 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Vifa1g10832 337 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Vifa1g10832 337 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Vifa1g10832 337 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Vifa1g10832 337 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Vifa1g10832 337 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Vifa1g10832 337 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Vifa1g10832 337 PIRSF FBPtase 9 337 IPR028343 GO:0042132
Vifa1g10832 337 Gene3D - 204 337 - -
Vifa1g10832 337 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Vifa1g10832 337 Gene3D - 4 203 - -
Vifa1g10832 337 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Vifa1g10832 337 FunFam Fructose-1,6-bisphosphatase class 1 204 337 - -
Vifa1g10832 337 SUPERFAMILY Carbohydrate phosphatase 9 334 - -
Vifa1g10832 337 PIRSF FBPtase_SBPase 9 337 IPR000146 GO:0005975|GO:0016791
Vifa1g10832 337 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Vifa1g10832 337 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Vifa1g10832 337 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 334 IPR000146 GO:0005975|GO:0016791
Vifa1g10832 337 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10832 Vifa-Chr1 1820866703 1820868776 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vifa1g10832 FBPase 8.5e-78 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10832 K03841 - gmx:100797157 593.964