Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10829 ATGGCAGAAATTCAACACCATGCAGCTTCATTACCTCGTAGTGAATCAAAAATATACAACATGGATGTTGAAAACAAAGGAGAAGAAGAAAAGAATGATGAAAAAGACTATACTCAAAGAGCACAATGGCTTAGAGCAGCTGTATTAGGTGCTAATGATGGTTTACTCTCAACAGCCTCCTTAATGATGGGTATTGGAGCTGTTAACAAAGATGTTAAGACAATGATTCTAACAGGAATTGTTGGTCTTGTTGCTGGTGCATGTAGCATGGCAATCGGTGAATTTGTTTCTGTTTTTTCACAATATGATATTGAGTTTTCTCAAATGAAAAGACAAGGAAACACTTCTCAGAAAGATAAATTACCTAACCCTTATTACGCGGCTTTCGCTTCCGCCGTTGCATTTGCGGTCGGCGCGTTGGTGCCGCTGCTCGGCGCGGCGTTTGTGAAAGATTATAAGGTTAGGTTGGGAGTTGTGGTTGGTGTTGTGAGTGTTGCTTTGTTTGGTTTTGGATTGTTGAGTGGTTTTCTTGGGAAAGCACCTTTGGTTAAGTCTTCTTTTAGGGTTTTGATTGGTGGATGGCTTGCTATGTCTCTTACTTTTGGTTTAACTAAGCTTGTAAACCATGTCGGAGTTTGA 639 0.4038 MAEIQHHAASLPRSESKIYNMDVENKGEEEKNDEKDYTQRAQWLRAAVLGANDGLLSTASLMMGIGAVNKDVKTMILTGIVGLVAGACSMAIGEFVSVFSQYDIEFSQMKRQGNTSQKDKLPNPYYAAFASAVAFAVGALVPLLGAAFVKDYKVRLGVVVGVVSVALFGFGLLSGFLGKAPLVKSSFRVLIGGWLAMSLTFGLTKLVNHVGV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10829 212 Pfam VIT family 44 117 IPR008217 GO:0005384|GO:0030026
Vifa1g10829 212 Pfam VIT family 112 204 IPR008217 GO:0005384|GO:0030026
Vifa1g10829 212 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 209 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10829 Vifa-Chr1 1820331825 1820332463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10829 15 212 Nodulin-like Gene Family AT3G43660 64.824 2.31e-88 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10829 K22736 - gmx:100811713 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10829 1 1820331825 1820332463 Vifa1g10829 1 1820331825 1820332463 ECH