Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10763 ATGTTGATGTTCGCCAAGCCAACTTTGCCATTTCCCCACGGTGGTGCTTTGCACTTATGCACCCCCAAAAGAAAAAGGCATCTTGTTTTCATTGCCCATGTAAGAGGTCATCAGGTAAGGAAGCAGTATAAAACTGTCATCTGGTCGGTGGGAATCCTGGAGAAGGTTATATTACGCTGGAGACGCAAGGGTAGTGGTCTACGTGGGTTTCGACCAGAATCCCTTAATAAAGCCCCCAGTCAACCAAATGATTCTTCGAAAGAGGATGATTATGATTTTCTAAAGGAAGGACGAAAACAAAAAGAGGAAAAGATCCAAAAGGCTCTTTCTAGGGTGAAGTCCATGGTCCAGTATCCGGAGGCACGGGCTCAATACCGGCGCGTGCTAAATGTTGTCGAAGACTTCCGTCAAAAGAAGGATTCTAATATGGGTTTGATCAGTTCTGAAGAGACTGTTGATGGTGTAGAGGATTTGATCGATATTGATATGCTTTTAGATGATGATAATTTCATTCCCATAGCATTTGATTGA 531 0.4331 MLMFAKPTLPFPHGGALHLCTPKRKRHLVFIAHVRGHQVRKQYKTVIWSVGILEKVILRWRRKGSGLRGFRPESLNKAPSQPNDSSKEDDYDFLKEGRKQKEEKIQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQKKDSNMGLISSEETVDGVEDLIDIDMLLDDDNFIPIAFD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10763 176 Coils Coil 91 111 - -
Vifa1g10763 176 MobiDBLite consensus disorder prediction 83 99 - -
Vifa1g10763 176 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 28 138 - -
Vifa1g10763 176 MobiDBLite consensus disorder prediction 69 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10763 Vifa-Chr1 1811254447 1811255139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10763 24 171 CAMTA Transcription Factor Family AT5G09410 58.861 1.91e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10763 K21596 - gmx:100818124 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10763 1 1811254447 1811255139 Vifa1g10764 1 1811261023 1811268130 PCT