Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10747 ATGGAGAGCTTAGCACTTCACTCGCTCTCCACTCCTTCATCAACCTTCTTATTCCATCGTCGTCCACAACCCATTTTCAGATCTCAATCATCTCTTCCATTCAATCCATCTTCACGTTCAACCCCATCAATCAAATCATCATCAATCTCTCAATTTCCCTCTAAAGCTTCAACCTTTAACCCTTTCTCAAAACCCCATTTCCCAATTCATGCAAATTCATCTCCTCCTCCTCCTCCATCACCATTACCATCACCACCGTCCAAATCAGAACCCCTACCCACTATACTTCAAGGTGCAAAGCCAATTCCTTTTCTCATTTCAATTTCCATAGGTCTCATTGTGAGGTTCTTTGTTCCAAAGCCTGTTGAAGTTACTGCTCAAGCATGGCAATTGCTTTCAATTTTCCTCTCAACCATAGCTGGGCTTGTTCTAAGCCCGTTGCCTGTTGGTGCTTGGGCTTTTCTGGGTCTGACAGCATCTGTGGTCACAAAAACTTTGAGCTTTACAGCTGCATTTAGTGCTTTTACTAATGAAGTGATTTGGTTGATTGTGATATCTTTTTTCTTTGCTCGTGGGTTTGTGAAAACTGGTTTGGGTGATAGAATTGCTACTTATTTTGTGAAATGGATGGGAAAGAGTACTTTGGGGCTTTCTTATGGTTTGGTGTTTAGTGAGGTTCTTATTGCACCTGCTATGCCTAGTACTACTGCTAGAGCTGGTGGTGTTTTCTTGCCTATTATTAAGTCACTTGCACTCTCTGCTGGGAGTGAACCAAATAGTCCTACCTCTAAGAGGTTGGGCTCTTTTCTTGTTCAGAACCAATTTCAGTGTGCAGCAAACTCCAGTGCTCTTTTCCTAACTGCTGCTGCTCAAAACCTGCTGTGTATTAAATTAGCTGAGGAGCTTGGGGTGATAATTTCAAACCCTTGGGTTACGTGGTTTAAGGCAGCTAGTTTACCCGCATTAGTTTGTCTTCTTGCTACGCCGTTGATTTTATACAAGATCTGTCCCCCTGAAATTAAGGACACACCAGAAGCACCTGCCATGGCTACTAAGAAACTGGAAACCATGGGCCCTGTCACTAAAAATGAATGGATTATGGTTTCTACAATGCTTTTTGCAGTCTCTTTGTGGATCTTCGGAGATGCTATTGGCATAGCAAGTGCCGTAACTGCGATGGTTGGTTTATCAATACTCCTCGTAACAGGAGTCCTAGACTGGCAAGACTGTTTGAATGAAAAATCGGCATGGGATACCTTGGCTTGGTTTGCCATTCTAGTAGGTATGGCAAGTCAGTTGACAAACCTCGGGATTGTGGGCTGGATGTCTGATTGTGTGGCCAACAGCCTTCGAACATTCTCCTTGAGTTGGCCAGCATCATTGGCTGTCCTTCAGTCTGCTTATTTCTTCATCCACTACCTTTTTGCAAGCCAGACTGGGCACGTAGGGGCTTTATTCTCTGCGTTTCTTGCCATGCAAAGGGCAGCCGGTGTTCCTGGTGTTCTTGCAGCTCTTGCTTTAGGTTATAATACAAATCTTTTCGGTGCAATTTCTCACTACAGCAGTGGTCAAGCTGCTGTATACTATGGAGCTGGCTATGTCGACCTTCCTGATATATTCAGAACAGGGTTCATTATGGCAGTTATTAACGCGGTCATCTGGGGAGGTGTTGGCTCTGTGTGGTGGAAATTTTTGGGCTTGTATTGA 1707 0.4405 MESLALHSLSTPSSTFLFHRRPQPIFRSQSSLPFNPSSRSTPSIKSSSISQFPSKASTFNPFSKPHFPIHANSSPPPPPSPLPSPPSKSEPLPTILQGAKPIPFLISISIGLIVRFFVPKPVEVTAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTASVVTKTLSFTAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLVFSEVLIAPAMPSTTARAGGVFLPIIKSLALSAGSEPNSPTSKRLGSFLVQNQFQCAANSSALFLTAAAQNLLCIKLAEELGVIISNPWVTWFKAASLPALVCLLATPLILYKICPPEIKDTPEAPAMATKKLETMGPVTKNEWIMVSTMLFAVSLWIFGDAIGIASAVTAMVGLSILLVTGVLDWQDCLNEKSAWDTLAWFAILVGMASQLTNLGIVGWMSDCVANSLRTFSLSWPASLAVLQSAYFFIHYLFASQTGHVGALFSAFLAMQRAAGVPGVLAALALGYNTNLFGAISHYSSGQAAVYYGAGYVDLPDIFRTGFIMAVINAVIWGGVGSVWWKFLGLY 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10747 568 MobiDBLite consensus disorder prediction 27 61 - -
Vifa1g10747 568 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 66 568 IPR030676 -
Vifa1g10747 568 MobiDBLite consensus disorder prediction 27 91 - -
Vifa1g10747 568 Pfam Sodium:sulfate symporter transmembrane region 105 567 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vifa1g10747 568 MobiDBLite consensus disorder prediction 70 90 - -
Vifa1g10747 568 NCBIfam DASS family sodium-coupled anion symporter 120 562 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10747 Vifa-Chr1 1808003231 1808006081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10747 1 568 Antiporters AT5G64290 72.232 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10747 - - gmx:100782873 900.968