Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10691 ATGAAAGCTGTTATCGAGCGCTATAACAAACAGAAAGAAGAACAACATCAGCTAATGGATCCTGCTTTAGAAGTCAAGTTTTGGCAGACAGAAGCAGCTGGACTGAGACAACAACTGCAGTACTTGCAAGAAAGCCATAGGCAATTGATGGGTGAAGGACTTTCTGGTTTGGGTATTAAAGAACTACAAAATCTGGAAAATCAACTGGAGATTAGTCTGAAGGGTGTTCGAATGAAAAAGGATCACATTTTGACTGATGAGATTAAAGAACTACACCAAAAGGGAACTCTTGTCCATCAAGAAAATATGGAACTCCATAAAAAGATGGACTTCATCCAGAAAGAAAATGCAGAGCTACAAAAGAAGGTAAATGAACAAAATGTGGTATCCAATCTTTCATGCAGTATCAGAAATGAGTATGATTTACATGCGCCTATCAGTCTCCAGCTAAGCCAGCCGCAGTCTCAATACAGTGAACCAGCAACCAAAAACATGAAATTAGGATTACAGCTGCATTCCTAA 522 0.3908 MKAVIERYNKQKEEQHQLMDPALEVKFWQTEAAGLRQQLQYLQESHRQLMGEGLSGLGIKELQNLENQLEISLKGVRMKKDHILTDEIKELHQKGTLVHQENMELHKKMDFIQKENAELQKKVNEQNVVSNLSCSIRNEYDLHAPISLQLSQPQSQYSEPATKNMKLGLQLHS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10691 173 Pfam K-box region 24 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vifa1g10691 173 Coils Coil 102 129 - -
Vifa1g10691 173 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vifa1g10691 173 Coils Coil 59 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10691 Vifa-Chr1 1796949912 1796950929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10691 1 154 MADS-box Gene Family AT3G57230 53.125 1.35e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10691 K09264 - gmx:100805092 250.366