Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10673 ATGGAAGCGTGGTTCATCGTACTCCTCACTCTCTGCGTCATCTTCCTCATCAAAGCCACCGTCTCCACCCTCACCACCACCACCAAAACCGCCACTCTCCCTCCCGGTCCACTCCACATCCCCATCCTCACAAGCCTCCTATGGCTCCGAAAATCCTTCTCCCAACTCGAACCTTTTCTCAAAACCCTTCACGCCAAACACGGTCCCATCATCGCTCTCAGAATCGGTTCTCGACCTTCCGTTTTCATCGCCGACCGTTCTCTCGCTCACCACGCTCTCGTTCATAACTCGTCAATCTTCTCCGACCGCCCTAAAGCACTTCCCACCGGAAAGCTCATGTCCAGCAACCAGCACAATATCAGTTCCGCTTCTTATGGTGCCACGTGGAGAACCCTCCGCCGTAACCTGGCCTCCGAGATGCTCCATCCGGCGAAAGTCAAATCTTTCTCAGAAATCCGGAACTGGGTCCTTGACACTCTCATCAGCCGTCTCAAAACGGCTTCGGAGTCTGAATCCTTTATGGCTGTTCCCCACTTTCATTATGCAATGTTCTGTTTACTTGTTTTTATGTGTTTTGGTGAAAGAGTTAGCGATGAGAAAGTTAATGAAATTGAACGTGTACAAAGGACGCTTCTGTTGAGTATGAGCAGATTCAATATATTGAATTTCTGGCCTCAAGTTACTAAGATTTTGCTGAGGAAAAGATGGGAGGAGTTGTTGAAGTTGCGTAAGGGTCAGGAAGATGTTTTGCTTCCGCTGATAAGAGCCAGGAAGCAAAATAAGGGAAGTAAGAGTGTTGTTTCTTATGCGGATACTCTCTTGGAGTTGGAGTTAAAGGAGGAGAATCGCAAGTTGAATGAAGATGAAATGGTTAGTCTTTGTTCTGAGTTTTTGAATGGTGGCACGGACACGACTTCCACGGCTTTGCAGTGGATTATGGCGAATTTGGTCAAGTATCCGGATGTGCAGAGAAAGCTTGTGGAGGAGATTAGGGAGGTAATCGGTGGTGATGATAGTGGATTGAACAAGGAAGTGAAAGAGGAAGATTTGCAGAAACTTCCTTATCTGAAATGTGTGGTTTTGGAAGGGTTGAGGCGTCATCCACCAGCGCATTTTGTGTTGCCCCACGCGGTGAAAGAGGATGTGGTTTTGAATGGTTATTTGGTGCCTAAAGATGGGACTGTGAATTTTATGGTGGCGGAGATGGGGTGGGATCCTCTTGTTTGGGAGGATCCGATGGAGTTTAAGCCGGAGAGGTTTTTGAAGGATGAAACGTTTGATATTACAGGAAGTAAAGAGATAAAGATGATGCCGTTTGGAGTTGGGAGGAGAATTTGTCCGGGATATCATTTAGCTTTGCTTCATTTGGAATATTTTGTGGCTAATTTGGTTTGGAATTTTGATTGGAAGGTTCCAAAGGGTGGAGATGTGGATTTGACAGAAAAACAGGAATTTACTATGGTCATGAAAAATCCATTGCAGGTTCACATTTCTCCTAGGATCTAG 1506 0.4608 MEAWFIVLLTLCVIFLIKATVSTLTTTTKTATLPPGPLHIPILTSLLWLRKSFSQLEPFLKTLHAKHGPIIALRIGSRPSVFIADRSLAHHALVHNSSIFSDRPKALPTGKLMSSNQHNISSASYGATWRTLRRNLASEMLHPAKVKSFSEIRNWVLDTLISRLKTASESESFMAVPHFHYAMFCLLVFMCFGERVSDEKVNEIERVQRTLLLSMSRFNILNFWPQVTKILLRKRWEELLKLRKGQEDVLLPLIRARKQNKGSKSVVSYADTLLELELKEENRKLNEDEMVSLCSEFLNGGTDTTSTALQWIMANLVKYPDVQRKLVEEIREVIGGDDSGLNKEVKEEDLQKLPYLKCVVLEGLRRHPPAHFVLPHAVKEDVVLNGYLVPKDGTVNFMVAEMGWDPLVWEDPMEFKPERFLKDETFDITGSKEIKMMPFGVGRRICPGYHLALLHLEYFVANLVWNFDWKVPKGGDVDLTEKQEFTMVMKNPLQVHISPRI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10673 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vifa1g10673 501 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 FunFam Cytochrome P450 family protein 27 501 - -
Vifa1g10673 501 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 493 - -
Vifa1g10673 501 CDD CYP77_89 66 494 - -
Vifa1g10673 501 Pfam Cytochrome P450 34 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10673 501 Gene3D Cytochrome P450 26 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10673 Vifa-Chr1 1793723618 1793725123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10673 1 500 Cytochrome P450 AT1G64940 56.335 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10673 K24184 - gmx:100795683 724.931