Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g10608 | ATGATGATCACAACAAACCATTGCCAAACCTTATTTTCGTTTGCCTGTCTGTCGTGTTTCTTTTGTTTCTGCTCAGAATTCTCATGTGCCGCTTCAACTTCCAGAGTCAGTATCAAACATGGTGATTTCATCAGAGACAAAGAAGGCGAAGTTTTAGTCTCCAATGGCTTCAACTTCGTAGTGGGTTTCTTCGGTTTTCAAAACTCTTCTTCTCGTTACGTTGGTATTTGGTACTACAGCATTCCTGGACCTCAAGTTATTTGGGTTGCAAACAGAAACAAACCCATCAACGGTAACGGTGGATCCATCACTATATCTACAAACGGCAATTTAGTCATTCTTGATGAAAACAAAACACAACTCTGGTCTACCAATGTTTCCATCATTGACAGCAACAAAAACAACTCCGAAGCTGTTCTTAAAGATAATGGTAATCTTGTTCTTTCAAATGGGAAAGTGGTGTTATGGGAAAGTTTTGAAAATCCAACTGATACTTATCTACCTGGTATGAAAGTTCCTGTGAATGGGAAGAGCTTTAACTTCACTTCATGGAAATCAAGTACAGATCCTTCATTAGGGAACCATACAATGGGAATTGATCCAGAAGGGTTACCACCACAGATAGTAGTTTGGGAAGGAGAGAAAAGAAAATGGAGAAGTGGTTATTGGGATGGTAGAGTTTTCACTGGTGTTGATATGACAGGTAGTTTTCTTCATGGTTTTGTTCTTAATTTGGATAATAATGGAGGAGATAGGTACTTTGTTTATAATAATAAGTTGTTGTTGAATGGTACTAGTTCTGTGAGGTTTCAGATTGGTTGGGATGGTTATGAAAGAGAGTTTATTTGGAATCAAAATGAGAAAAATTGGACTGAGAAACAAAAAGGGCCTCATAATGAGTGGGAGGTTTATAACTTTTGTGGTGGTTTTGCAGCTCGTGATTTGTTGGTTTCGGGTTCGGCTACTTGTAGTTGCTTACAAGGGTTTGAACTAAAGGATAAAGGGAATTTGTCAGGTGGATGTAGGAGGATGACAGCATTGAAGGGCGAACAGAAGAATGGTAGTTTTGGAGAAGATGGTTTCATGGAGCTTAGGTGTATGAAGTTACCCGATTTCGCGAATTTGGTGGTACATACTACGGATTGTGAAGGTGATTGTTTGAAGAATGGTTCTTGCACTGCCTATGCAGAAGTTATGGGAATTGGTTGCATGGCTTGGTATGGAGAGTTGGTAGATCTTCAAACGTTCGAACATGGAGGGAATACATTGCACATTCGTCTTGCTCATTCTGATTTAGTTAATAACAAGAAGATAGTGATTCTGATAATATCAGCTGTTCTAGCAGGGCTAATCTCTCTAGGAATGTTTGTATGGTTGGTACGGATGAACAAGAGAAAACTCAAAGTTTCTACTGCTTCGCCTCGCAAAAATAGTGATATAATACCAATGTTTGATGCAAGAAAGAGCAGACAGATGTCTGCAGAGTTATCAGGATCAATTGAACTTAGTTTGGAAGGCAATCAACTAAGTAAAACTAAGATTCCATTTTACAATTTTATTTGCATGTCAGCAGCAACCAACAATTTTTCTGAAGAAAATAAGCTCGGACAAGGTGGTTTCGGTCCTGTCTACAAGGGAATGCTTCCGACCGGAGAAGAAGTAGCTGTTAAGAGGCTTTCAAGACGATCAGGCCAAGGGGAAGAAAAGTTGCTTGTATATGAATTCATGCCAAACAAAAGCTTGGATTGCTTTTTATTCGATCCTATTAAGCAAACACAATTAAATTGGGCGAGACGTTTTGAAATCATTGAAGGAATTGCAAGAGGACTACTCTATCTGCATCGTGATTCAAGACTTAGAATTATTCATCGTGATCTAAAAGCAAGTAACATTTTGTTAGACGAAAACATGAACCCAAAAATATCAGATTTTGGCTTAGCCCGGATATTCGCTGGAAATCAAAATGAAGCCAATACAACCAGAGTGGTTGGTACATATGGTTATATGTCTCCTGAATACGTTATGGAAGGCCTATTTTCAGTCAAATCAGATGTATATAGTTTTGGTGTATTGCTACTAGAGATTGTGAGTGGCCGCAAAAACACTAGCTTTCGTCATTCAGATGATTCGAGTCTCATAGGTTATGCATGGCATCTTTGGAACGAACATAGAGCAATGGAACTTGTTGATGGTTGCATTCGCGATTCTTGCCCTAAAAACAAAGCATTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCAGGTCATAGACCAAACATGTCGAATGTTGTGTTGATGCTTGAGAGTGAAGCAACCACTCTTCCTTTACCTGTGCAGCCTTTGATTACTTCCATGAGGAGTTATGAAGACAGAGAATTTTACATGGATGGTCTTGATGTTTCAAATGATCTCACGGTCACAATGCTAGTAGGGAGATAG | 2448 | 0.3909 | MMITTNHCQTLFSFACLSCFFCFCSEFSCAASTSRVSIKHGDFIRDKEGEVLVSNGFNFVVGFFGFQNSSSRYVGIWYYSIPGPQVIWVANRNKPINGNGGSITISTNGNLVILDENKTQLWSTNVSIIDSNKNNSEAVLKDNGNLVLSNGKVVLWESFENPTDTYLPGMKVPVNGKSFNFTSWKSSTDPSLGNHTMGIDPEGLPPQIVVWEGEKRKWRSGYWDGRVFTGVDMTGSFLHGFVLNLDNNGGDRYFVYNNKLLLNGTSSVRFQIGWDGYEREFIWNQNEKNWTEKQKGPHNEWEVYNFCGGFAARDLLVSGSATCSCLQGFELKDKGNLSGGCRRMTALKGEQKNGSFGEDGFMELRCMKLPDFANLVVHTTDCEGDCLKNGSCTAYAEVMGIGCMAWYGELVDLQTFEHGGNTLHIRLAHSDLVNNKKIVILIISAVLAGLISLGMFVWLVRMNKRKLKVSTASPRKNSDIIPMFDARKSRQMSAELSGSIELSLEGNQLSKTKIPFYNFICMSAATNNFSEENKLGQGGFGPVYKGMLPTGEEVAVKRLSRRSGQGEEKLLVYEFMPNKSLDCFLFDPIKQTQLNWARRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFAGNQNEANTTRVVGTYGYMSPEYVMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWHLWNEHRAMELVDGCIRDSCPKNKALRCIHIGMLCVQDSAGHRPNMSNVVLMLESEATTLPLPVQPLITSMRSYEDREFYMDGLDVSNDLTVTMLVGR | 815 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g10608 | 815 | PIRSF | SRK | 565 | 815 | IPR024171 | GO:0004674 | |
Vifa1g10608 | 815 | PIRSF | SRK | 6 | 569 | IPR024171 | GO:0004674 | |
Vifa1g10608 | 815 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 621 | 633 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g10608 | 815 | Pfam | D-mannose binding lectin | 86 | 185 | IPR001480 | - | |
Vifa1g10608 | 815 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 86 | 190 | IPR036426 | - | |
Vifa1g10608 | 815 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 576 | 778 | - | - | |
Vifa1g10608 | 815 | CDD | B_lectin | 49 | 162 | IPR001480 | - | |
Vifa1g10608 | 815 | SUPERFAMILY | Protein kinase-like (PK-like) | 515 | 796 | IPR011009 | - | |
Vifa1g10608 | 815 | Pfam | S-locus glycoprotein domain | 218 | 332 | IPR000858 | GO:0048544 | |
Vifa1g10608 | 815 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 30 | 159 | - | - | |
Vifa1g10608 | 815 | SMART | serkin_6 | 529 | 746 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g10608 | 815 | Pfam | PAN-like domain | 357 | 413 | IPR003609 | - | |
Vifa1g10608 | 815 | Gene3D | Transferase(Phosphotransferase) domain 1 | 577 | 777 | - | - | |
Vifa1g10608 | 815 | Gene3D | Phosphorylase Kinase; domain 1 | 491 | 576 | - | - | |
Vifa1g10608 | 815 | SMART | blect_4 | 43 | 162 | IPR001480 | - | |
Vifa1g10608 | 815 | ProSiteProfiles | Protein kinase domain profile. | 529 | 785 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g10608 | 815 | Gene3D | - | 33 | 159 | IPR036426 | - | |
Vifa1g10608 | 815 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 20 | 761 | - | - | |
Vifa1g10608 | 815 | Pfam | Protein tyrosine and serine/threonine kinase | 566 | 768 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g10608 | 815 | CDD | PAN_AP_plant | 354 | 428 | - | - | |
Vifa1g10608 | 815 | ProSiteProfiles | Bulb-type lectin domain profile. | 35 | 161 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g10608 | Vifa-Chr1 | 1786087175 | 1786090219 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g10608 | 434 | 783 | Receptor kinase-like Gene Family | AT4G23230 | 47.368 | 8.84e-112 | 352 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa1g10608 | PK_Tyr_Ser-Thr | 5.7e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g10608 | - | - | gmx:106794169 | 1124.77 |