Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10593 ATGAAGAAAAAATGTGAACTCTGCAAAAGTCCAGCAAACTTGTTCTGTGAATCAGATCAAGCAAGTCTTTGTTGGGAATGTGATACTAGGGTTCACACTGCAAATTTCATTGTCACAAAACATCAAAGGTTTCTTCTTTGTCATATTTGTCAATCTTTAACTGCTTGGCATGGAACTGGACCCAAGTTTGTTCCAACCATGTCTCTTTGTAACTATTGTGTTTCTGTTACCAATGGTCATCAAAATCACGATGACGACGACGAAGACGATGACGATGAAGATGAAGACAGCGATGATGATGATGATGATGAAGAAAATCAAGTTGTTCCATGGAAATCTACACCTCGACCAGTTTCTTCTTGTTCTTCAAATAGTGCAACTACCTATTAG 390 0.3821 MKKKCELCKSPANLFCESDQASLCWECDTRVHTANFIVTKHQRFLLCHICQSLTAWHGTGPKFVPTMSLCNYCVSVTNGHQNHDDDDEDDDDEDEDSDDDDDDEENQVVPWKSTPRPVSSCSSNSATTY 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10593 129 MobiDBLite consensus disorder prediction 112 129 - -
Vifa1g10593 129 SMART bboxneu5 1 46 IPR000315 GO:0008270
Vifa1g10593 129 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 124 - -
Vifa1g10593 129 MobiDBLite consensus disorder prediction 84 106 - -
Vifa1g10593 129 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Vifa1g10593 129 CDD Bbox1_BBX-like 4 46 - -
Vifa1g10593 129 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Vifa1g10593 129 MobiDBLite consensus disorder prediction 78 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10593 Vifa-Chr1 1784305813 1784306202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10593 1 104 C2C2-CO-like Transcription Factor Family AT4G27310 48.113 8.93e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vifa1g10593 zf-B_box 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10593 - - cam:101492786 186.808