Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10588 ATGGGATCGGATAGAGTGATGGCAACGGCAGCACCAGTGAGAATGGTGGCTCTAGTGACAGGACTTGAGATTCAAGGGCAGGTCTTGGGAGAAACTGATCCTCGGTTCGGTGGAACGTGTCGCCGGAAGACATTGGTTTACCTGATTCTTGCGCTCTATCACATGTATCCAGATTATGACTTCAGGAGAATATCACTGTCCAGTGCTAAACAAAGTTTTCACCGAGTTTACACACATTGTGCAGTCAAGACTACTGGAAATGTCTTTTGCTATGAGGAGTTAAACATCAAAACTAAAAACTGGAAGGAGCTACTCACCGATGAGACATTCACTAGGGATGACCTTATAACTATTCAGAATCCTAATGCACTTGACCAGAAGGTTCTTCTGGATTTTGATCATGTTAAACAAAATTTGAAAATTGATGATGAAGAACTACAGAAAATGAGTTCAGATCCAACCTATAACATAAACATGTCGGAACTAGGGGATTTCGATGCCATTTTTCCGAGGCATCTGCAAGGCCCTCACGCCCAAATATGCACCGGTTTCCCAGGCATCTGCAAGCCTTCTTCGCCGGTGAATGATGCATCTGCTGCCAAGCCTTCTTCGCCAGTGAACGATGCAACTGCTGCCAAGCCTTCTTCATCGCCTCCACCTCCTCCATCTATGAAAGCTTTAAGAAGGTCGACAAGGCCACGGAAACAAAATTTGAAGTATAGCCCAAGCGAATACAAGTAA 741 0.448 MGSDRVMATAAPVRMVALVTGLEIQGQVLGETDPRFGGTCRRKTLVYLILALYHMYPDYDFRRISLSSAKQSFHRVYTHCAVKTTGNVFCYEELNIKTKNWKELLTDETFTRDDLITIQNPNALDQKVLLDFDHVKQNLKIDDEELQKMSSDPTYNINMSELGDFDAIFPRHLQGPHAQICTGFPGICKPSSPVNDASAAKPSSPVNDATAAKPSSSPPPPPSMKALRRSTRPRKQNLKYSPSEYK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10588 246 Gene3D Repressor of RNA polymerase III transcription Maf1 22 152 IPR038564 -
Vifa1g10588 246 MobiDBLite consensus disorder prediction 196 213 - -
Vifa1g10588 246 MobiDBLite consensus disorder prediction 192 246 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10588 77 160 U-box Gene Family AT5G67530 77.273 5.90e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10588 K10598 - lja:Lj2g3v1968380.2 157.147