Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10545 ATGAAAGGTGATTATCATAGGCTTGGTCTTGCTCTGAACTTCTCCATGTTTTACTATGAGATTCTCGACTCTCCTAACAGGGATTGCGGCCTTACAAAACAGGATTTTGATGAAGTTATTACCGATTTGGATACATTGGGAGAGGAGTCATACAAGGATAACACTTTTATTATGCAACTTCTCTGTGATAACATCACCCTTTGGACCTCTGATATGGAGGATGACAGTGCTGATGAAATCATAGAAGCTGAACCGAAAGGAAATGATGAACCACAGTAA 279 0.3978 MKGDYHRLGLALNFSMFYYEILDSPNRDCGLTKQDFDEVITDLDTLGEESYKDNTFIMQLLCDNITLWTSDMEDDSADEIIEAEPKGNDEPQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10545 92 Gene3D - 1 83 IPR036815 -
Vifa1g10545 92 SMART 1433_4 1 82 IPR023410 -
Vifa1g10545 92 SUPERFAMILY 14-3-3 protein 4 78 IPR036815 -
Vifa1g10545 92 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Vifa1g10545 92 PRINTS 14-3-3 protein zeta signature 15 41 IPR000308 -
Vifa1g10545 92 Pfam 14-3-3 protein 5 69 IPR023410 -
Vifa1g10545 92 PANTHER 14-3-3 PROTEIN 6 74 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10545 Vifa-Chr1 1774126899 1774127297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10545 7 92 14-3-3 family AT1G78300 73.563 1.48e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10545 K06630 - rcu:8281681 125.561