Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10384 ATGGGTTCTGGTTTTTGGTTTAAAGCAATAATTAGCTTGAGGAATAGGAAGTCAAAAGATCGAAGATCAAAGAAAGCAAAGGGTACTTTAGCTCTGGAGAAGCTAAGTGCATTGAAGTCGAACAAGTCTCCAGGAAATGAGTCTAGTGATTTAGCAAATGGAAACCAAAATGAAAATCTTGCATCAGTTGAAACTACTGCTGCAACAAGGATCCAGACTGCATTCCGGGCTTATAAGGCTAGGAAGGCTCTACGACGATTGAAAGGTTTCACGAAACTGAAGAATTTAACACAAGGTTATTCTATTCAAAAGCAAGCCAGTACAACTATAACATATCTTCATTCATGGAGCAGAATACAGAGTGAAATTAGAGCTCGTCGAATCTGTATGGTCACAGAAGACAAGATCAGGCGGAAGAAGCAAGAATCTCAACTAAAACTTGAGGAGAAGCTTCATGATTTCGAGGTTGAATGGTCCGGCGGCCCTGAAACGGCGGAGGAAACCCTTGGTAGGATACATCAGAGAGGAGAAGCAGCAGTTAAGCGTGAAAGAGCCATGGCTTATGCCTTTTCTCATCAGTGGAGAGCAAACTCTAGTCAGAGCCAAGTACTAGGCAGTTACGAGCTCGGCAGAGCTAACTGGGGTTGGAGCTGGAAGGAACGCTGGATCGCCGCTCGTCCATGGGAAAGCCGTGTCGCTAGCATTAGCCCGAAGAAAACTCAAAATAAACTATCATTCAAGGTTCAAAAGGATAAAAAAACATCAGCATCTAAAACTCCGGTTTCGGTAACACCTCCTTCCTCCAATGCAAAAGGTACTCCTCCTCCTAAAGGGAGTAGTACCAAAGGCAGGAGATTGTCTTTTCCAACCACAGAGAAAGAGAAAAATGTGGCTGAAGAAGGAGTGAATTGA 912 0.4364 MGSGFWFKAIISLRNRKSKDRRSKKAKGTLALEKLSALKSNKSPGNESSDLANGNQNENLASVETTAATRIQTAFRAYKARKALRRLKGFTKLKNLTQGYSIQKQASTTITYLHSWSRIQSEIRARRICMVTEDKIRRKKQESQLKLEEKLHDFEVEWSGGPETAEETLGRIHQRGEAAVKRERAMAYAFSHQWRANSSQSQVLGSYELGRANWGWSWKERWIAARPWESRVASISPKKTQNKLSFKVQKDKKTSASKTPVSVTPPSSNAKGTPPPKGSSTKGRRLSFPTTEKEKNVAEEGVN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10384 303 MobiDBLite consensus disorder prediction 39 55 - -
Vifa1g10384 303 MobiDBLite consensus disorder prediction 234 303 - -
Vifa1g10384 303 ProSiteProfiles IQ motif profile. 64 92 IPR000048 GO:0005515
Vifa1g10384 303 MobiDBLite consensus disorder prediction 287 303 - -
Vifa1g10384 303 MobiDBLite consensus disorder prediction 255 276 - -
Vifa1g10384 303 PANTHER IQ-DOMAIN 5-RELATED 1 269 - -
Vifa1g10384 303 MobiDBLite consensus disorder prediction 36 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10384 Vifa-Chr1 1732758077 1732760281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10384 1 289 IQD Protein Family AT2G33990 53.448 2.61e-83 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10384 - - gmx:100786185 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10384 1 1732758077 1732760281 Vifa1g10384 1 1732758077 1732760281 ECH