Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10373 ATGAAGTCTCTTGCAACAACCTCTTTCTTATGTGCTCTACTTCTGTTTGGAGTGTTATTACCTTTCTCCTCAAATGCACAACTTGATCCATCCTTTTACAACAACACTTGTCCAAACGTTAGTTCCATTGTTCGTGATGTCATAAGAAATGTTTCCAAAACAGATACTCGTATGCTTGCTAGTCTCGTCAGGCTTCACTTCCATTATTGCTTTGTTCAAGGTTGTGATGCATCAGTTTTGTTGAACACAACGGATACCATTGTGACTGAACAAGATGCTTTTCCAAATATCAACTCTTTGAGAGGTTTAGATGTTGTCAACAAAATCAAAACAGCTGTAGAAAGTGTTTGTCCTAACACTGTTTCTTGTGTTGATATTCTTGCACTTGCAGCTGAATTATCATCTACACTGTCTCAAGGTCCTGATTGGAAAGTTCCATTAGGAAGAAGAGATAGTTTAACAGCAAACCAAACACTTGCTAATCAAAATCTTCCAGGCTCCCTCAAATCACACCAGTTGGTGCTCCGCGAGGATTGTAACCCTTTCTTCCTTATATTTCGCCTTCACCATTGA 573 0.3909 MKSLATTSFLCALLLFGVLLPFSSNAQLDPSFYNNTCPNVSSIVRDVIRNVSKTDTRMLASLVRLHFHYCFVQGCDASVLLNTTDTIVTEQDAFPNINSLRGLDVVNKIKTAVESVCPNTVSCVDILALAAELSSTLSQGPDWKVPLGRRDSLTANQTLANQNLPGSLKSHQLVLREDCNPFFLIFRLHH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10373 190 ProSiteProfiles Plant heme peroxidase family profile. 27 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 Gene3D - 28 182 - -
Vifa1g10373 190 PANTHER PEROXIDASE 72-RELATED 25 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 Pfam Peroxidase 44 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 SUPERFAMILY Heme-dependent peroxidases 27 173 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g10373 190 FunFam Peroxidase 31 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10373 Vifa-Chr1 1731211851 1731212423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10373 9 170 Peroxidase AT5G06720 53.086 3.39e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10373 K00430 - gmx:112997600 235.728