Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10369 ATGGCTTTTGGTCTTCACAAAATGGGTGTTTCACAGGGTGATGTTGTTTTGCTTTTACTTCCCAACTCAATTTACTATCCCATTATACAATTAGGTGTTATGTATCTAGGTGTTGTTGTTACACCATTGAATCCTGTCAGTAGTGTTGCTGAAATTCGTAAGCAGGTTAATGAGTGTGGTGTGAGTTTTGCTTTTACTATACCCGAAAATTTTAAGAAACTAGAGCCATTCAACATTCCAAATATTATTGTGCCAGTTATTAAACAAGAAGACACTGCTGGTATATTGTATTCTTCTGGTACTACAGGTGTTAGCAAAGGAGTTGTTTTAACGCATAGAAATTTAATTGCTATGGTTGAACTATTTGCGAGGTTTCAAGCTTCTTCTTCTTCTTCCAAAAATGTGTTTCTAGCTGTTTTGCCAATGTTTCATATATTTGGTTTATCGCTCACTACTACCGGATTACTGTCGTTGGGTTCTACGGTTGTTGTAATGAAAAAATTTCAAATTGAAGAGGCTATTAGGGTGATTGATGAATACAATGTTACACACTTTGATGTTGTTCCACCCATGTTAGTGACATTGACAGAAAAGGCGAAGCGGGTTAATGGAAGTAAGTTGCTGAGTTTGAGACGTGTTTTATGCGGCGCCGCGCCTTTAACCACAACAATTATAAATGAATTTGTCCAAGTTTTCCCTAATGTTGATTTAATACAGGCTTATGGAATGACTGAGTCTGCTGCAGTAGGAAGTTGCTGCTTCGATAGTGACAAGTTTCACAACTATTCTTCAGTAGGATTGTTAGATGGAGGCAAAAGTGGTAGACGTGAACAATGGTGCACTTTTGCCCCCAGGAAGAAGTGGCGGGCTTTAGTTGCGAGGGCCTTCGATTACGAAAGGATATTTAAATAA 912 0.3827 MAFGLHKMGVSQGDVVLLLLPNSIYYPIIQLGVMYLGVVVTPLNPVSSVAEIRKQVNECGVSFAFTIPENFKKLEPFNIPNIIVPVIKQEDTAGILYSSGTTGVSKGVVLTHRNLIAMVELFARFQASSSSSKNVFLAVLPMFHIFGLSLTTTGLLSLGSTVVVMKKFQIEEAIRVIDEYNVTHFDVVPPMLVTLTEKAKRVNGSKLLSLRRVLCGAAPLTTTIINEFVQVFPNVDLIQAYGMTESAAVGSCCFDSDKFHNYSSVGLLDGGKSGRREQWCTFAPRKKWRALVARAFDYERIFK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10369 303 ProSitePatterns Putative AMP-binding domain signature. 95 106 IPR020845 -
Vifa1g10369 303 Pfam AMP-binding enzyme 2 267 IPR000873 -
Vifa1g10369 303 Gene3D - 112 256 - -
Vifa1g10369 303 Gene3D - 84 111 - -
Vifa1g10369 303 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 268 - -
Vifa1g10369 303 Gene3D Luciferase; Domain 3 257 267 - -
Vifa1g10369 303 Gene3D - 2 76 - -
Vifa1g10369 303 SUPERFAMILY Acetyl-CoA synthetase-like 2 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10369 Vifa-Chr1 1731040933 1731042230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10369 1 281 Monolignol Biosynthesis Gene Families AT4G19010 50.637 4.48e-97 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10369 K01904 - gmx:100804808 360.147