Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g10363 | ATGATGCTAAATCCAAGGTATGCCATTCCCAAATTCTCTCCTAATCCTATTCTAACTTCTTCTACATTGTTTCTTTATCGCTTCTTCAGTCATTTGCAATGCCACTATGGTAGAAAAAGTTCTGGGTTTCATAATGTAGATGCTGTTGTTACTCGTTTCAATTGCTTGATTCGCGCACTTTCTCCGCCACCCACTTGTGAATTTGACAAGGTTTTAGGAGCTATTGTGAGGATGGGTCATTATCCCACTGCAATTTCTCTTTTTTCGCAGTTTCAACTTAGGGGAATTTCACCTTCCATTGCTACTTTCAGCATCTTGATTAACTGTTTTTGTCATCAATCTCATATGGGTTTTGCTTTTTCGTTATTGGGTACCATTCTTAAGAGTGGCTATGAACCTAACATGGTGACTTTTAATACAATTATTAATGGTTTTTGTATGAATGGGATGATTTTTAAAGCTTTGAACTTTTACCAAGACCTAGTAGCCCAAGGGTATCTTTTTGATGAGTTTACTTATGGGATTTTAATCAATGGGTTGTGTAAAAATGGGCAAACTAGAGCTGCGTTGCATTTGATACAAGAGATGGAGGAACGGTCGGTTGAACCGAATCTAGTAATGTATAGTGCAGTCATTGATGGACTATGCAAAGATGGACTTGTCACGGATGCGCTTAGTTTGTGTTCTCAGATGGCTGATAAGGGAGTTTTACTTGATGTTGTCACGTACAACTCTTTAATTCGTGGTTGTTGCAGTCTGGATCCCTTTGCTGAGGCAAATGCTGAGGACTCTGGTGCCGGTGCCGGGACAAAAGGATATGTTCATGTCCGTGTACAACAGCGTAACAGAAGGAAAAGCTTAACAATTGTTCAAGGGTTAAAGAAAGAGTTCAGCTATAGCAAGATACTCAAGGACTTGAAGAAAGAATTTTGTTGTAATGGTACTGTTGTCGAGGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGAGATCAAAGGAAGAATGTTTCTACTTTCCTTGTGCAGGTCATACAACTTCAGGGAGATCAAAGGAAGAATGTTTCTACTTTCCTTGTGCAGGCTGGCATTGTAAAGAAGGAGAATATCAAGCTTCATGGTTTTTAA | 1125 | 0.3973 | MMLNPRYAIPKFSPNPILTSSTLFLYRFFSHLQCHYGRKSSGFHNVDAVVTRFNCLIRALSPPPTCEFDKVLGAIVRMGHYPTAISLFSQFQLRGISPSIATFSILINCFCHQSHMGFAFSLLGTILKSGYEPNMVTFNTIINGFCMNGMIFKALNFYQDLVAQGYLFDEFTYGILINGLCKNGQTRAALHLIQEMEERSVEPNLVMYSAVIDGLCKDGLVTDALSLCSQMADKGVLLDVVTYNSLIRGCCSLDPFAEANAEDSGAGAGTKGYVHVRVQQRNRRKSLTIVQGLKKEFSYSKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQRKNVSTFLVQVIQLQGDQRKNVSTFLVQAGIVKKENIKLHGF | 374 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g10363 | 374 | SUPERFAMILY | eIF1-like | 343 | 374 | IPR036877 | GO:0003743|GO:0006413 | |
Vifa1g10363 | 374 | NCBIfam | translation initiation factor SUI1 | 251 | 342 | IPR005874 | GO:0003743 | |
Vifa1g10363 | 374 | Gene3D | - | 343 | 374 | - | - | |
Vifa1g10363 | 374 | Gene3D | Tetratricopeptide repeat domain | 197 | 260 | IPR011990 | GO:0005515 | |
Vifa1g10363 | 374 | Gene3D | Tetratricopeptide repeat domain | 127 | 196 | IPR011990 | GO:0005515 | |
Vifa1g10363 | 374 | Gene3D | Tetratricopeptide repeat domain | 36 | 126 | IPR011990 | GO:0005515 | |
Vifa1g10363 | 374 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 99 | 133 | IPR002885 | - | |
Vifa1g10363 | 374 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 169 | 203 | IPR002885 | - | |
Vifa1g10363 | 374 | Pfam | PPR repeat family | 203 | 252 | IPR002885 | - | |
Vifa1g10363 | 374 | Pfam | PPR repeat family | 61 | 112 | IPR002885 | - | |
Vifa1g10363 | 374 | Pfam | PPR repeat family | 133 | 182 | IPR002885 | - | |
Vifa1g10363 | 374 | FunFam | Eukaryotic translation initiation factor SUI1 | 244 | 343 | - | - | |
Vifa1g10363 | 374 | SUPERFAMILY | eIF1-like | 253 | 342 | IPR036877 | GO:0003743|GO:0006413 | |
Vifa1g10363 | 374 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 204 | 238 | IPR002885 | - | |
Vifa1g10363 | 374 | NCBIfam | pentatricopeptide repeat | 102 | 134 | IPR002885 | - | |
Vifa1g10363 | 374 | NCBIfam | pentatricopeptide repeat | 206 | 239 | IPR002885 | - | |
Vifa1g10363 | 374 | NCBIfam | pentatricopeptide repeat | 136 | 169 | IPR002885 | - | |
Vifa1g10363 | 374 | NCBIfam | pentatricopeptide repeat | 171 | 204 | IPR002885 | - | |
Vifa1g10363 | 374 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 274 | 344 | IPR001950 | GO:0003743|GO:0006413 | |
Vifa1g10363 | 374 | PANTHER | MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE | 45 | 259 | - | - | |
Vifa1g10363 | 374 | CDD | eIF1_SUI1 | 272 | 373 | IPR005874 | GO:0003743 | |
Vifa1g10363 | 374 | Gene3D | - | 261 | 342 | - | - | |
Vifa1g10363 | 374 | Pfam | Translation initiation factor SUI1 | 271 | 342 | IPR001950 | GO:0003743|GO:0006413 | |
Vifa1g10363 | 374 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 134 | 168 | IPR002885 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g10363 | Vifa-Chr1 | 1729648896 | 1729651002 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g10363 | 252 | 374 | Eukaryotic Initiation Factors Gene Family | AT1G54290 | 73.171 | 7.13e-55 | 174 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g10363 | - | - | psat:127105702 | 475.322 |