Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10356 ATGAGTCAAGGACTTGAAGTAAACAAGTCACCTAGCTTTAAAGTGACCTTGAAGTACATGGCCACTTTAATTAGTATATCAGTTGAGCCCTTCGACGACCTAGAAAATCTATCAGAGATAAACATGCTTAGTCCTGAAGGTGAACTGAAAATAAGCTTCGGCTATCAATGCAATGACGACAGAGGTATCCCTTGCAAGGTTGCCAAAGGCTGCAAAATCCTTCCTGAAATGCGAAGAACAAGCAGTTTCTCTTGTTTGTCTGGTGATGCTTTGAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGAGAAGAAATCCTTCCGAATTTGGACTCTCCTAATTCATTTCGGCGGGTTCCCTCTTCGCCATGTCTTGGAATGTTGGACATGCTATCATCTTCTTTCCAAAGTAGTTTGTCAAACCTAAGTTGCAGCCCATCCAGTCCAAGTCTTATGCTTGAATACGACCCTTGTTTGTTAAGACTCATGAGTCCTTCCTCTAGAAATGAAAGTTTTCTCAATGCAACAGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTATTTTGTGCAATTTATGACGGATTTAATGGGAGAGATGCGGCGGATTATCTTGCTTGTACTCTTTATGACTCTATTGTATCTTATCTTGCTTGTACTCTATTGTTGGTTTCCGATTTCGTTCGACTTTGCTTTAAATATGAAGGTTCTGCAGTTCAGTGCAGTAATCAAATTGGTGTAAGTAATGGTGACTCTGCATCTGTACCGTATTTGAAGGATTGGCATTTTGTGAAGGAGTATCCTGATTACGTACCATACATCACTCCGATGTTCTTTTGTGATGATTGGCTCAACTTGTATCTCGATAACTTTAGAATGAATACTTATTCCGACAGAGACCAGCAAAATAAGGAAATATGTTGCTCTGACTATCGTTTTGTTTACATGGGAGTAAAAGGTGTGATTTTAGTTGGGAAGAAATCTTGA 1041 0.4006 MSQGLEVNKSPSFKVTLKYMATLISISVEPFDDLENLSEINMLSPEGELKISFGYQCNDDRGIPCKVAKGCKILPEMRRTSSFSCLSGDALSANATLANTNICNGVIGEEILPNLDSPNSFRRVPSSPCLGMLDMLSSSFQSSLSNLSCSPSSPSLMLEYDPCLLRLMSPSSRNESFLNATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADYLACTLYDSIVSYLACTLLLVSDFVRLCFKYEGSAVQCSNQIGVSNGDSASVPYLKDWHFVKEYPDYVPYITPMFFCDDWLNLYLDNFRMNTYSDRDQQNKEICCSDYRFVYMGVKGVILVGKKS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10356 346 SUPERFAMILY PP2C-like 188 247 IPR036457 -
Vifa1g10356 346 Gene3D - 164 266 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10356 Vifa-Chr1 1728069152 1728071499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10356 45 235 PP2C-type Phosphatase Gene Family AT3G16560 69.036 5.82e-74 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10356 - - mtr:112419487 328.176