Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g10291 | ATGGGAATGAGATGTAACACATTTGGATTTTGGTTTTGGATTTGTATTTGCTTTATTTCTGTTTGGGGAATTAGTGAGTGTTTGTCGCTTAATGATGAAGGATTGGCTTTGTTGGAGGTTCGTCGAAGAATAACTTGTGATCCTCGTCTTGCTTTGGAAAATTGGAATCCAAATGATTGTGACCCTTGCAACTGGTTCGGGGTTCATTGCGTCAACGGTAAAGTGCAGACTTTGGACCTAAATGGTCTGTCCTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTAGTCACTTAAAATCACTTGTGTTAAGCAATAATAACTTTTCTGGTGACATTCCTAAAGAGCTTGGAGATTTAGCTGAGTTAGAGTTATTAGATTTAAGGGAGAATAATTTATCAGGATGCATCCCACCAGAACTTAGTAAAATGTTATCCCTAAAGCACTTATTGCTTTGTGATAACAACATAGAAGAAAGTGATTCCCAAGACCAAGGAAATTTCAGATTATTTTCTAAATCTCTACTTGATGAATGTTCATCGCCTCTCGCGACATTATTTGCCTGCATTAATAGAAAGTTTGGTCACTGTGTGTGGCATAGCAACGTCAAGCAATGGAACAAACCAGATTCGTTGATTATTCCGATTAAAGTAGCACTTCTGAAATGCCTCGATGTCTTTTCGCTGCCTCTGTTCAAGCAAGTCCATGAAGAGAAATATTTCGACCTTCAGCGTCGTGTTAACGAACCAGAAATCGCGATGCATGTGCCAAACCTTATCAATTATGGGCGTCGTAGGTTACTTGAACATTCGAGTAACCTTGCAGCCGCACCTTATAAAGGTGAACCTCCAAAAGATTTCAGTAAAACTCCAATTAGCATTAGTAGTGGATCTTCTCCAGCTTTTCCACAAGCAAAAAAGAAGCAAAATCAGTCACATACACCATTACCTCCTTCTGATTCTCTTCCAAATGATGGAAACCAAACAAGTCAACATCGACTGGGAATACATGAAAGCGTGTGGAAGTATATACTTATCGTCATAGGCATTGTTGTGATTGTCGTTTTGATCATAGTTCTTCTTTGCCTTTGGACAAAACCAGCAGTTAAAATAATTAAACCTTGGAACACAGGCATAAGTGGACAGTTGCAAAAAGCTTTTATAACAGGCGTTCCTAAGTTGAATAGGGTAGAATTAGAGACAGCTTGTGAAGATTTCAGCAATATTGTTATTAGTTTTGAAGCATGCACTATATTCAAAGGAACATTGTCTAGTGGAGTTGAAATTGCTGTTGTCTCTAGTCTATTTACTTCTCCAAAACAATGGACTAAGAACATGGAATTGATCTATAGAAGAAAGATTGCGACATTGTCCCGCATTAACCATAAGAACTTTGTTAATCTTATTGGATATTGTGAGGAAGAAGAACCATTCTCGAGGATGTTTGTATTTGAATATGCCCCAAATGGAAGCCTATTTGAGTACCTACATGTTAAAGACGTTGAACGTCTTGAATGGAGTGAAAGAATAAGAATAATAATGGGAACTGCGTATTGTCTTACATACATGCACGGTTTAAGTCCACCAATATCTCATACCAAAGTTGCTTCAAGTTTGATCATGTTGACAGATGATTATGCTGCAAAGCTCGCAGAGATCACTTTTAGAAGTATTGTAGAACCTCCTAGGACAACTAGAGGTGACTCTTCAAACAAATCTGAGATGCAACGCGCGGCTTTTGACACCAATGTCTATGATTTCGGAATATTGTTGCTAGAAATCATTTCCGGGAAATTGCCTCATTCTGAAGAACAAGGAAGTCTTGTCAACTGGGCTTCTGAGTACTTAAATGACAGAAGAAGTATAAGTTATATGATTGATCCGAGTCTGAAATCATTCAAAGACAATGAACTGGACGTGATCTGTGAGGTGATTCAAGGGTGTATCCAACCCGAACCGAAGTTAAGGCCAACAATGAAAGACATAACTTCCAAATTAAGAGAAGTGGTTAATGTAACACCTGATCAAGCTTCTCCAAGGCTTTCTCCATTATGGTGGGCTGAACTTGAGATATTATCAGTGGAGGCTACTTGA | 2094 | 0.3873 | MGMRCNTFGFWFWICICFISVWGISECLSLNDEGLALLEVRRRITCDPRLALENWNPNDCDPCNWFGVHCVNGKVQTLDLNGLSLEGTLAPELGKLSHLKSLVLSNNNFSGDIPKELGDLAELELLDLRENNLSGCIPPELSKMLSLKHLLLCDNNIEESDSQDQGNFRLFSKSLLDECSSPLATLFACINRKFGHCVWHSNVKQWNKPDSLIIPIKVALLKCLDVFSLPLFKQVHEEKYFDLQRRVNEPEIAMHVPNLINYGRRRLLEHSSNLAAAPYKGEPPKDFSKTPISISSGSSPAFPQAKKKQNQSHTPLPPSDSLPNDGNQTSQHRLGIHESVWKYILIVIGIVVIVVLIIVLLCLWTKPAVKIIKPWNTGISGQLQKAFITGVPKLNRVELETACEDFSNIVISFEACTIFKGTLSSGVEIAVVSSLFTSPKQWTKNMELIYRRKIATLSRINHKNFVNLIGYCEEEEPFSRMFVFEYAPNGSLFEYLHVKDVERLEWSERIRIIMGTAYCLTYMHGLSPPISHTKVASSLIMLTDDYAAKLAEITFRSIVEPPRTTRGDSSNKSEMQRAAFDTNVYDFGILLLEIISGKLPHSEEQGSLVNWASEYLNDRRSISYMIDPSLKSFKDNELDVICEVIQGCIQPEPKLRPTMKDITSKLREVVNVTPDQASPRLSPLWWAELEILSVEAT | 697 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g10291 | 697 | SUPERFAMILY | Protein kinase-like (PK-like) | 418 | 666 | IPR011009 | - | |
Vifa1g10291 | 697 | Pfam | Protein tyrosine and serine/threonine kinase | 447 | 666 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g10291 | 697 | MobiDBLite | consensus disorder prediction | 296 | 330 | - | - | |
Vifa1g10291 | 697 | FunFam | Inactive receptor-like serine/threonine-protein kinase | 378 | 486 | - | - | |
Vifa1g10291 | 697 | Pfam | Leucine rich repeat N-terminal domain | 31 | 70 | IPR013210 | - | |
Vifa1g10291 | 697 | PANTHER | PROTEIN MALE DISCOVERER 2 | 20 | 695 | - | - | |
Vifa1g10291 | 697 | Gene3D | Ribonuclease Inhibitor | 29 | 201 | IPR032675 | - | |
Vifa1g10291 | 697 | ProSiteProfiles | Protein kinase domain profile. | 369 | 670 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g10291 | 697 | Gene3D | Transferase(Phosphotransferase) domain 1 | 487 | 679 | - | - | |
Vifa1g10291 | 697 | FunFam | Nuclear pore complex protein NUP107 | 30 | 178 | - | - | |
Vifa1g10291 | 697 | SUPERFAMILY | L domain-like | 34 | 162 | - | - | |
Vifa1g10291 | 697 | Gene3D | Phosphorylase Kinase; domain 1 | 381 | 486 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g10291 | Vifa-Chr1 | 1714683257 | 1714687147 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g10291 | 69 | 677 | Receptor kinase-like Gene Family | AT5G56040 | 24.238 | 1.28e-39 | 155 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Vifa1g10291 | PK_Tyr_Ser-Thr | 4.5e-18 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g10291 | - | - | adu:107468254 | 815.068 |