Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10290 ATGAAGAAGAGTTTCTCAGAATTCTACGAGAAATGGATTCTGAAGTTAGAGGAAATTCATCACCAGCTTCTGAAAGTATCAAAAAGAGAGATGGTGATGAATGAACAAGAGCTTCAAGCACTTGTTTCAAAAGTCACGACTCATTTGAAAGAGTACTACACTGTGAAATGGAGTTTAGCACATGAAGATGTTGCACTTTTCTTCTCACCAACATGGGTTACTCCACTGGAAAACGCTTACCTTTGGATAACTGGGTGGAAACCGTCTACAGTCTTTTGCATACTCGGAAAATTGGACATGACAGATGAGCAGAAGAAGAAGGTAGAGGGACTGAGAATGAAGACAAAGATGGAGGAAGAGAAAGTGGAAGGGGAGATGGAGAGGCAACAAGTGGCTATGGCTGATTTGAAGATGGTGAAGCTAGCAAAAATCTCGTGCAGAGCTAGGAAAGATGACGCAAGAGTTGATGGGTTGGTTGACGTGGCTTTGAAAGGAGTTTTTGGTGGATTGGAGAAAGTAATGAAAAGCTCAGATTGTGTTAGACTTAAGACACTGAAAGGGGTTTTGGATGTTCTTAGTCCAATTCAGTGTGTTCAGTTTTTGGCTGCACATATTGGTATGCAGTTAAGGTTGAGGCAACTTGGGATGAACAAGATCACTCAGAAGGATCCATAA 675 0.4148 MKKSFSEFYEKWILKLEEIHHQLLKVSKREMVMNEQELQALVSKVTTHLKEYYTVKWSLAHEDVALFFSPTWVTPLENAYLWITGWKPSTVFCILGKLDMTDEQKKKVEGLRMKTKMEEEKVEGEMERQQVAMADLKMVKLAKISCRARKDDARVDGLVDVALKGVFGGLEKVMKSSDCVRLKTLKGVLDVLSPIQCVQFLAAHIGMQLRLRQLGMNKITQKDP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10290 224 ProSiteProfiles DOG1 domain profile. 2 221 IPR025422 GO:0006351|GO:0043565
Vifa1g10290 224 Pfam Seed dormancy control 26 95 IPR025422 GO:0006351|GO:0043565
Vifa1g10290 224 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 4 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10290 4 214 bZIP Transcription Factor Family AT3G12250 28.037 2.96e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10290 - - psat:127115880 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10290 1 1714677114 1714677788 Vifa1g10290 1 1714677114 1714677788 ECH