Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10203 ATGAACAACATCATTTCCACAACATGTTTGTTCCTTCTCCTTCTTCCATTATTAGCCTCATGCACCAAAAACAAACAGGTTTATCTTGTTGAATTTGAAGAAAACACTAATGGAGAAAAAACAATGCATGAAATAGAGAATACACATCACTCTTATTTACGTTTGGTTAAAGAAAGTGAGGAAGATGCTAGAGCTTCACTTCTTTATAGTTACAAACACACTTTCAATGGCTTTGCAGCATTGCTTACACCAAACGAAGCCAATAATCTCTCAGGAATGGAAGGAGTGGTGTATGTGAGAAAGAGTGAGAGAAAGATATACTCATTGCATACCACAAGGTCATGGAAATTTGTAGGGTTAGATAGGTCATTTGATCCTTATGAAGAAAAATCCAATGAAACAAATGGAGATTTATTAGCCAAAGGAAAATATGGGCAAGATATTATTGTAGGAATGATTGATAATGGTGTATGGCCAGACTCAAAGAGCTTTAGTGATGAAGGGATGGGACCAGTTCCACAAAAATGGAAAGGAGTGTGCCAAAATGGAACTGATTTTGATTCATCTAATTGCAATAGAAAGATAATTGGAGCAAGATACTACTTGCAAGGTTATGAAAGTATCTATGGCCCTCTAAACGAAACAGACGATTACAAATCGGCTCGTGACAAAGACGGCCACGGAACACACACGTCCTCAATAGTAGCAGGGCGTGCGGTTCCAAATGCGTCAGCACTTGGAGGCTTCGCCAGTGGCACAGCCATTGGCGGAGCCCCATTAGCCCGCCTTGCAATATACAAAGCATGTTGGGCGATAAAAGGAAAACCCAAAAACGAAGGAAACGTTTGCACAAACATTGATATGCTTAAAGCTATAGATGATGCAATTGAGGATGGTGTTGATGTTATAAGTATTTCAATTGGGTTTCCTCAGCCAGTGAAATATGATGATGATGTTATTGCTAAGAGTTCTTTACAAGCTGTTAGGAAAAACATTGTTGTTGTTTGTAGTGCTGGAAATGCTGGTCCTGGTCCTCATAGTTTGTCGAATCCTGCTCCTTGGATTATCACTGTTGGCGCTAGTACCGTTGATCGTTCCTTTGTTGCTCCGGTTATCCTTAGCAATGGCACAATCATTGAGGGTAGATCCATTACTCCATTTCACAAAGAAAACATTTTTCGTCCATTAGTTCTAGCTAATGATGCTGAATATGCAGGCATAACAAGTGCAAATTCTTCCGGGTATTGTCTAGACAATACTCTTGATCCTATCAAAGTAAAAGGGAAGATAGTTTTATGTATGAGAGGGATAGGTGGAAGATTGAAAAAAGGGTTGGAAGTTGAAAGAGCTGGTGGTTTTGGTTTCATACTAGGGAACAATAAAACTTATGCAAATGATTTAGCTTCTGATCTTCATTTCATTCCAGCCACTGCAGTTACCTATGAGAACACATTAAAACTTGTTCAATACATTAATTCTACCCTTAATCCAATGGCACAACTTTTGCCTGGAACAACCGTGTTAGATACCAAACCAGCACCCTCTATGGCCTTGTTCTCTAGTAGAGGTCCCAATATAATAGACCCTAATATTCTAAAGCCTGACATAACAGCTCCAGGAGTAGACATATTGGCAGCATGGACAGCTGAAGATGGACCTACAAGAATGACTGATAATGATAAACGAGTTGTTAAGTACAATATCTTTTCAGGAACATCAATGTCTTGTCCTCATGTTTCTGCTGCATCTGTTCTTCTCAAAGCCATGCACCCTACATGGAGTCCTGCTGCTATTAGGTCTGCCCTAATGACTTCGGCAAGAACAACAGACAATACAGGAAATCCAATAACAGATGAAACAGGAAACCCTGCAACACCTTTTGCAATGGGTTCTGGTCACTTCAACCCTAAAAAAGCATCAAATCCAGGACTCATCTATGATGCATCCTTCAATGATTATCTTCTTTACCTTTGTAATCTCAAATTAACACAAAACATAAGCATTACATATACCTGTCCAAATCCATTACCTCAACCATTTGATCTCAACTATCCATCAATTCAAATCCATAAACTCAATTACACCAAGACTATAAAAAGGACAGTGACCAATGTTGGTAGAAGCATAAGTGTTTACAAGTTTAATGCTAAGCCACCAAAGGAATTTACCATAAAAGCCACTCCAAGTGTTTTGAAATTTACACATGTTGGACAGAAAAGGAATTTTGTCATCACAGTGACAAAAAGTAGAGATGAGTTAGCAAGTGAAAGTGATTCTGAGAAGTACTTTTTTGGTTGGTATAGTTGGACTGACAAATATCATGTTGTGAATTGTCCAGTGGCAGTGTCTTTTCAATGA 2358 0.3876 MNNIISTTCLFLLLLPLLASCTKNKQVYLVEFEENTNGEKTMHEIENTHHSYLRLVKESEEDARASLLYSYKHTFNGFAALLTPNEANNLSGMEGVVYVRKSERKIYSLHTTRSWKFVGLDRSFDPYEEKSNETNGDLLAKGKYGQDIIVGMIDNGVWPDSKSFSDEGMGPVPQKWKGVCQNGTDFDSSNCNRKIIGARYYLQGYESIYGPLNETDDYKSARDKDGHGTHTSSIVAGRAVPNASALGGFASGTAIGGAPLARLAIYKACWAIKGKPKNEGNVCTNIDMLKAIDDAIEDGVDVISISIGFPQPVKYDDDVIAKSSLQAVRKNIVVVCSAGNAGPGPHSLSNPAPWIITVGASTVDRSFVAPVILSNGTIIEGRSITPFHKENIFRPLVLANDAEYAGITSANSSGYCLDNTLDPIKVKGKIVLCMRGIGGRLKKGLEVERAGGFGFILGNNKTYANDLASDLHFIPATAVTYENTLKLVQYINSTLNPMAQLLPGTTVLDTKPAPSMALFSSRGPNIIDPNILKPDITAPGVDILAAWTAEDGPTRMTDNDKRVVKYNIFSGTSMSCPHVSAASVLLKAMHPTWSPAAIRSALMTSARTTDNTGNPITDETGNPATPFAMGSGHFNPKKASNPGLIYDASFNDYLLYLCNLKLTQNISITYTCPNPLPQPFDLNYPSIQIHKLNYTKTIKRTVTNVGRSISVYKFNAKPPKEFTIKATPSVLKFTHVGQKRNFVITVTKSRDELASESDSEKYFFGWYSWTDKYHVVNCPVAVSFQ 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10203 785 Pfam PA domain 395 485 IPR003137 -
Vifa1g10203 785 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Vifa1g10203 785 ProSiteProfiles Serine proteases, subtilase domain profile. 114 640 - -
Vifa1g10203 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Vifa1g10203 785 MobiDBLite consensus disorder prediction 607 621 - -
Vifa1g10203 785 Gene3D Peptidase S8/S53 domain 147 653 IPR036852 GO:0004252|GO:0006508
Vifa1g10203 785 FunFam Subtilisin-like protease SBT1.5 147 412 - -
Vifa1g10203 785 Pfam Fibronectin type-III domain 681 782 IPR041469 -
Vifa1g10203 785 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Vifa1g10203 785 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
Vifa1g10203 785 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Vifa1g10203 785 CDD PA_subtilisin_like 371 499 - -
Vifa1g10203 785 CDD Peptidases_S8_3 107 606 IPR034197 -
Vifa1g10203 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 782 IPR045051 -
Vifa1g10203 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
Vifa1g10203 785 Gene3D - 364 508 - -
Vifa1g10203 785 SUPERFAMILY Subtilisin-like 110 644 IPR036852 GO:0004252|GO:0006508
Vifa1g10203 785 Pfam Subtilase family 145 630 IPR000209 GO:0006508|GO:0008236
Vifa1g10203 785 FunFam subtilisin-like protease SBT1.5 364 508 - -
Vifa1g10203 785 Gene3D - 657 784 - -
Vifa1g10203 785 MobiDBLite consensus disorder prediction 607 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10203 Vifa-Chr1 1697038445 1697044164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10203 19 784 Subtilisin-like Serine Gene Family AT5G45650 55.784 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10203 - - gmx:100793064 1207.2