Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10201 ATGTCTCAAGTTCAATATTCATCTTCAAAGGATTCCTCAAGGGATTATTGTTCTCTCGAGTTGTTATTTGTAATACAAGTTAAAGTTTCATGGGGAATTGAGGATTTGATTAGGGAACTGTCGGATTTAGCTTCTACTTCTGGAACCTATATGACAAATGATAAGAGTAGCCATTATCTTCTTGATAATATGAGTTGCCAACTTGATTATAATGAGGTTCCAATAGATATTGCTTCCCCAGAAAATTTGGCTCTAATAGATCTAGCAATTGGTGGTGAAGAACTTGATGAATATAAAGACTGGACATCTAAAATAGGCCTTAACCTATGGTTCTGTGTCAACAATATAAACAAATCTCCATGTGAACAAGTTCCTTTGACACTAGCATTAGGGATGCAACTCTATCATAAACATCCTGGTTTATCTATAAATTGGCATTCACGGAAAACTCGGTCTAAAAGGTCAAATCATTTAGCTCAGTCTCAACCTGATAACATTCAGATAAAAAAAGATGAATCCTCAAGTAGTTCTGAATATGCACAGAATAACAATGCAAACTCGAGTCAAAGAAACACGAACAATGATGAAAGTGCTAATGACAACAAAGATTCTAACCAAAATTTTCTAACAGAAAACTATTCTTAA 645 0.3411 MSQVQYSSSKDSSRDYCSLELLFVIQVKVSWGIEDLIRELSDLASTSGTYMTNDKSSHYLLDNMSCQLDYNEVPIDIASPENLALIDLAIGGEELDEYKDWTSKIGLNLWFCVNNINKSPCEQVPLTLALGMQLYHKHPGLSINWHSRKTRSKRSNHLAQSQPDNIQIKKDESSSSSEYAQNNNANSSQRNTNNDESANDNKDSNQNFLTENYS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10201 214 MobiDBLite consensus disorder prediction 156 214 - -
Vifa1g10201 214 MobiDBLite consensus disorder prediction 148 214 - -
Vifa1g10201 214 Coils Coil 213 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10201 Vifa-Chr1 1695800687 1695802549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10201 60 153 C2H2 Transcription Factor Family AT5G04240 37.755 3.81e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10201 - - lja:Lj5g3v1811440.1 124.405