Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10132 ATGGGGAAGCTAATAACAACTTCCAAACCTCTCATTCTCAAATCAAAACTCCTCTGTTTTTCACTTTTCTACCTCTTCACAACTCTCTTTCTTGCTCTTTACACCACTCTCTCTCAATCCAAATGTTTCTTCAGATCATCCCCTTCAGATCCAATTCTCAATTCTCTCTTCAATTACCCTTCTTCCTATGGAGAACATAAATACGCCGTTTCAACTACTCGTTCCACGTGTTCTTCCCCTGTTTTCTTTTCAGATTATTGGGATGTTGTCGATGAAATTAAGAATTTTCGGAAGAAATCTCGAGGTAATGATGGTTTTCTAAGGTATATGAAGGGTAATGCTGATACTTTTGGTGGAAATCTTAGTACCCTTACGAGGTTTTCTTATTTTAATCATCAAAATGATAGCATTGAAATTCCATGTGGATTTTTCAAAGGATTTCCAATCAGCAATTCTGACCAAAGTGCAATGGAAAAGTGTGACAATGTAGTGGTGGTTTCAGCAATTTTTAATGATCATGACAAAATAAGACAACCAAAGGGACTTGGATCCAAAACAATCGAAAACATGTGTTTCGTGATGTTCGTTGACAATGTTACTCTCAAAGGTTTAGAACATCATGGATTGATTTCGATAGAATCAAATGAATATATGATAGGTGTGTGGAGGATTGTGAAAGTTGTGAAAGATGATTTGTATGAGAATCCAGCAATGAATGGGATTATACCAAAATATTTAGTTCATAGGCTATTTCCGAATTCACAATTCAGTATTTGGGTAGATGCAAAATTGCAACTCATGGTTGATCCTTTGTTGTTGATCCATTCACTTGTTATGAATGAGAATGTTGATATGGCTATTTCAAAACATCCTTTTTATGTTCATACAATGGAAGAAGCTATGGCTACTGCTAGGTGGAAGAAATGGTGGAATGTTAATGGTTTGAAGATGCAAATGGAGACTTATTGTGAAAATGGATTGCAACCATGGAGTCCTATCAAGAAACCCTATGCATCAGATGTACCGGATAGTGCATTGATATTGAGGAAACATGGATTAAAAAACAACCTCTTTTCTTGTCTAATGTTCAATGAGTTAGAAGCATTCAATCCAAGAGATCAATTACCATTTGCATTTGTTAGGGATCACATGAATCCCAAACTGAAGCTAAACATGTTTGAGGTGGAAGTATTTGAACAAGTGGCAATTGAGTATAGGCACAATGTAAAGAGTAGTGATGGGACCAGTTTGAAGAAAATGTCTAGTTTAAGAAGAACCAAAAGGGCAGAGGCAGATTTGTATGTTAGTAATGGTAGCTGTTGTGGTGGGTGCCACAAATATCTTTCTACTATGTGGGGTGGTGAATCCAATGATTGA 1377 0.3638 MGKLITTSKPLILKSKLLCFSLFYLFTTLFLALYTTLSQSKCFFRSSPSDPILNSLFNYPSSYGEHKYAVSTTRSTCSSPVFFSDYWDVVDEIKNFRKKSRGNDGFLRYMKGNADTFGGNLSTLTRFSYFNHQNDSIEIPCGFFKGFPISNSDQSAMEKCDNVVVVSAIFNDHDKIRQPKGLGSKTIENMCFVMFVDNVTLKGLEHHGLISIESNEYMIGVWRIVKVVKDDLYENPAMNGIIPKYLVHRLFPNSQFSIWVDAKLQLMVDPLLLIHSLVMNENVDMAISKHPFYVHTMEEAMATARWKKWWNVNGLKMQMETYCENGLQPWSPIKKPYASDVPDSALILRKHGLKNNLFSCLMFNELEAFNPRDQLPFAFVRDHMNPKLKLNMFEVEVFEQVAIEYRHNVKSSDGTSLKKMSSLRRTKRAEADLYVSNGSCCGGCHKYLSTMWGGESND 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10132 458 PANTHER ALKALINE CERAMIDASE-RELATED 10 412 IPR006852 -
Vifa1g10132 458 Pfam Protein of unknown function (DUF616) 113 407 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10132 Vifa-Chr1 1676413809 1676415848 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10132 - - gmx:100809755 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g10132 1 1676413809 1676415848 Vifa1g10132 1 1676413809 1676415848 ECH
Vifa1g10132 1 1676413809 1676415848 Vifa6g02860 6 954678845 954685995 PCT