Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10123 ATGAGTAATACTCTTATCAAATCCGTATTATCAATACCAACATCTTTGTCTCTAACCCAACTAATCCCATACCTAATATGCTTCATCCTTTTCTTTCTCCTCCTTGAACAGATCTCATACCTCAACAAAAAACGTTTCATCCCAGGCCCATCTTTGGTTCTTCCCTTTATAGGCAACGCCATTCCATTGGTACGTGACCCAACCAAATTTTGGGACCTTCAATCCACGCTAGCTAAATCAACCCCTTTGGGCTTTTCAGCAAATTACCTTATTGGTAACTTCATAGTCTTCATTAGAGACACAGAACTCTGCCATAAGGTTTTCTCCAATGTTAAGCCCAACGCCTTCCACCTCGTGGGCCACCCATTCGGGAAGAAGCTCTTTGGGGAGCATAATCTTATTTACATGATGGGCCAAGAACACAAGAATCTCCGCCGTCGGATTGCGCCTAATTTCACTCCTAAGGCGCTTTCCACCTACACCTCGCTGCAGCAGATTATTATCCTCAAACATCTCAAGTCATGGGTTGAGAAAGCCCGAGAGAAGTCTATTCCTATACGTGTTCTGGCCCGTGATATGAATTTAGAAACCTCTCAGACGGTTTTCGTGGGCCCGTATTTGGGCCTGAAAGCCCGCGAGAGATTTGAAAGAGATTACTTTCTGTTCAACGTTGGTCTCATGAAGCTTCCCTTTGACTTTCCCGGAACGGCTTTTCGTAACGCGAGGCTCGCCGTTGACCGTCTCGCCGGAACCCTAGCTTCCTGCACGGCAATGAGTAAGGCCAAGATGGAGAAAGCTGAAGAGCCGTCGTGTCTCATCGATTTCTGGATGCAGGATACGATACGAGAGATCCAAGAGTCGAAGGTGAACGGAATAACAGCACCGCCGTTCTCCACCAACGCTGAGATCGGTGGTTATCTCTTTGACTTTCTCTTTGCCGCACAGGACGCTTCCACCTCGTCGCTGCTATGGGCGGTGACATTACTCGATTCGCATCCGGAGGTTCTTGATAAAGTCAGAAAGGAAGTCGCCGGAATCTGGTCTCCGGAGTCGGATGAACTTATAACAGCGGACCAGCTCCGGGAGATGAAGTATACACAAGCGGTGGCGCGTGAGGTTGTTAGATACCGACCGCCGGCGACACTTGTGCCACATATAGCAGCAGAGAATTTTCCGTTAACGGAATCATACTCAATTCCGAAAGGAGCGATCGTTTTTCCGTCGGCGTTCGAGTCATCGTTTCAGGGTTTTACTGAACCGGATCGGTTCGACCCAGACCGGTTTTCGGATGAGAGACAAGAGGATCAAATATTTAAAAGAAACTTTCTGGCGTTTGGAGCTGGGCCCCACCAATGTGTGGGCCAGAGATACGCTTTGAATCACCTTGTTCTGTTCATTGCTATGTTCACTTCGTTGATTGATTTCAAGCGAGATAGAACGGACGGCTGTGATGAGATCGTGTATGTTCCTACTATTTGTCCGAAAGACGATTGCAGGGTGTTTCTGTCTAAGCGGTGTGCAGAGTATCCTTCTTTCCCTGGGGTTCAGGAGCTGGGGAATTGA 1563 0.4798 MSNTLIKSVLSIPTSLSLTQLIPYLICFILFFLLLEQISYLNKKRFIPGPSLVLPFIGNAIPLVRDPTKFWDLQSTLAKSTPLGFSANYLIGNFIVFIRDTELCHKVFSNVKPNAFHLVGHPFGKKLFGEHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTSLQQIIILKHLKSWVEKAREKSIPIRVLARDMNLETSQTVFVGPYLGLKARERFERDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLAGTLASCTAMSKAKMEKAEEPSCLIDFWMQDTIREIQESKVNGITAPPFSTNAEIGGYLFDFLFAAQDASTSSLLWAVTLLDSHPEVLDKVRKEVAGIWSPESDELITADQLREMKYTQAVAREVVRYRPPATLVPHIAAENFPLTESYSIPKGAIVFPSAFESSFQGFTEPDRFDPDRFSDERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFTSLIDFKRDRTDGCDEIVYVPTICPKDDCRVFLSKRCAEYPSFPGVQELGN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10123 520 Pfam Cytochrome P450 48 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 SUPERFAMILY Cytochrome P450 43 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vifa1g10123 520 Gene3D Cytochrome P450 39 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10123 520 PANTHER CYTOCHROME P450 26 46 470 - -
Vifa1g10123 520 FunFam Cytochrome P450 61 37 505 - -
Vifa1g10123 520 CDD CYP61_CYP710 84 498 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10123 18 512 Cytochrome P450 AT2G34500 69.215 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10123 K09832 - gmx:100808148 877.47