Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g10092 ATGTCCCAAACCCTTATTTCCCAAATTCACAATATTTCAATATTTCCACGGTACAAACTCTCCTTGCCGCCGTTTCACTATTTCCACTGTCCGTATACGCCATTTCCGTTCAGTACCCTTACGACCACCACCAAAACCGCAACTCTCCCTCCCGGCCCACTCCACATCCCCATCCTCACAAGCCTCCTATGGCTCCGAAAATCCTTCTCCCAACTCGAACCTTTTCTCAAAACCCTTCACGCCAAACACGGTCCCATCATCGCTCTCAGAATCGGTTCTCGACCTTCCGTTTTCATCGCCGACCGTTCTCTCGCTCACCACGCTCTCGTTCATAACTCGTCAATCTTCTCCGACCGCCCTAAAGCACTTCCCACCGGAAAGCTCATGTCCAGCAACCATCACAATATCAGTTCCGCTTCTTATGGTGCCACATGGAGAACCCTCCGCCATAACCTGGCCTCCGAGATGCTCCATCCGGCGAAAGTCAAATCTTTCTCAGAAATCCGGAACTGGGTCCTTGACACTCTCATCAACCATCTCAAAACGGCTTCGGAGTCTGAATCCTTTATGGCTATTCCCCACTTTCATTATGCAATGTTCTGTTTACTTATTTTTATGTGTTTTGGTGAAAGAGTTAGCGATGAGAAAGTTAATGAAATTGAACGCGTACAAAGGACGCTTCTGTTGAGTATGAGCAGATTCAATATATTGAATTTCTGGCCTCAAGTTACTAAGATTTTGCTCAGGAAAAGATGGGAGGAGTTGTTGAAGTTGCGTAAGGGTCAGGAAGATGTTTTACTTCCGCTGATAAGAGCCAGGAAGCAAAATAAGGGAAGTAAGAGTGTTGTTTCTTATGCGGATACTCTCTTGGAGTTGGAGTTAAAGGAGGAGAATCACAAGTTGAATGAAGATGAAATGGTTAGTCTTTGTTCTGAGTTTTTGAATGGTGGCACGGACACGACTTCCACGACTTTGCAGTGGATTATCGCGAATTTGGTCAAGTATCCAGATGTGCAGATAAAGCTTGTGGAGGAGATTAGGGAGGTAATTGGTGGTGATGATAGTGGATTGACCAAGATAGTGGCACCTGGCGGTGAAACTTTGGGTGGTGTAATTGGTGCTTTCCAACACATGATACGAACTGAAGGCATCTTTTCTCTATACAAGGGTTTAGTACCGTCACTTATAAGCATAGCTCCTTCTAGTGCTGTTTTTTATGGTGTATATGATATGCTAAAGTCATCTTATCTGCATTCACCCGAAGGAATGCAAAGAACCCATAATTTGCATAAACAGGGTCAGGAACTGAGTGCCTTTGATCAGCTTGAGTTGGGGCCAGTAAGGACATTGTTGTATGGGGGTATTGCTGTGGAACAAGGAGGCGTTTCAGCCCTCTATGCTGGACTTGTTCCCAGCTTATTACAGTCAACTAATACTACTGACAAAGGAGTAGATGGTTCTGATGCATCCTTTTCCATTTCCATGGCCGAAAATCAACCTCAAAATAATCTACCGATGCCTATGACAAATCCACCTCAAACTATTAATTTGGACAATGTTCATACTAGTAAATGA 1575 0.4444 MSQTLISQIHNISIFPRYKLSLPPFHYFHCPYTPFPFSTLTTTTKTATLPPGPLHIPILTSLLWLRKSFSQLEPFLKTLHAKHGPIIALRIGSRPSVFIADRSLAHHALVHNSSIFSDRPKALPTGKLMSSNHHNISSASYGATWRTLRHNLASEMLHPAKVKSFSEIRNWVLDTLINHLKTASESESFMAIPHFHYAMFCLLIFMCFGERVSDEKVNEIERVQRTLLLSMSRFNILNFWPQVTKILLRKRWEELLKLRKGQEDVLLPLIRARKQNKGSKSVVSYADTLLELELKEENHKLNEDEMVSLCSEFLNGGTDTTSTTLQWIIANLVKYPDVQIKLVEEIREVIGGDDSGLTKIVAPGGETLGGVIGAFQHMIRTEGIFSLYKGLVPSLISIAPSSAVFYGVYDMLKSSYLHSPEGMQRTHNLHKQGQELSAFDQLELGPVRTLLYGGIAVEQGGVSALYAGLVPSLLQSTNTTDKGVDGSDASFSISMAENQPQNNLPMPMTNPPQTINLDNVHTSK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g10092 524 ProSiteProfiles Solute carrier (Solcar) repeat profile. 318 415 IPR018108 -
Vifa1g10092 524 Gene3D Mitochondrial carrier domain 358 480 IPR023395 -
Vifa1g10092 524 Gene3D Cytochrome P450 42 357 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10092 524 MobiDBLite consensus disorder prediction 498 524 - -
Vifa1g10092 524 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 41 350 - -
Vifa1g10092 524 SUPERFAMILY Cytochrome P450 50 354 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10092 524 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10092 524 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10092 524 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10092 524 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g10092 524 SUPERFAMILY Mitochondrial carrier 368 476 IPR023395 -
Vifa1g10092 524 Pfam Mitochondrial carrier protein 369 417 IPR018108 -
Vifa1g10092 524 Pfam Cytochrome P450 50 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g10092 Vifa-Chr1 1666750881 1666753439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g10092 49 347 Cytochrome P450 AT1G64950 55.449 2.92e-123 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g10092 K24184 - gmx:100795683 420.239