Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09945 ATGGCTGAAGTTGCACAATCTAATGTCGAGCTGTTGGAATGGCCGAAAAAAGATAACCACCGCTTCCTGCATGTTGTTTACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTATACTGAAGTTTTTGGAATGAAACTTTTGAGGAAAAGAGATGTTCCGGAAGAGAAATATACCAATGCTTTTCTTGGATTTGGTCCTGAGCAAACAAATTTTGTTGTAGAATTAACTTATAATTATGGAGTGACCTCGTACGATATTGGAACTGGCTTTGGACATTTTTCTATCGCAACTCCAGATGTCTACAAATTTGTTGAAAACGTCCGAGCTAAGGGTGGAGTTGTCACGAGGGAGCCTGCTCTATTTGGTGACACTGTTTATGCCTTTGTGAAGGATCCTGATGGTTATGTTTTTGATATTGTCCAAAAAGCTTCAACCCCAGAGCCATTATGCCATATAATGTTTCGTGTTGGTGACTTAGACCGCACAATTAAGTTTTACGAAAAGGCTTTGGGTTTGAAGCTGGTGAAGAAGTTTGATATACCTCAAGAGAAGATCACTTTAGCAATAATTGGATATGGTGAAGAGCCTGAGAGAGTTGTGTTTGAGTTATTATATAACTATGGTGTCACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATTGGCACTGATGATGTATACAAGAGTGCCGAGGTAGTCAAGATAGTCACTCAAGAGCTTGGTGGGAAGATTACCAGGCAACCAGGGCCAATTCCTGGCATTAACACAAAGATCACTTCTTTCTTAGATCCAGATGGATGGAAAATAGTGTTGGTGGATAATCAAGATTTTCTGAAGGAGCTGGAATGA 858 0.4033 MAEVAQSNVELLEWPKKDNHRFLHVVYRVGDLDRTIKFYTEVFGMKLLRKRDVPEEKYTNAFLGFGPEQTNFVVELTYNYGVTSYDIGTGFGHFSIATPDVYKFVENVRAKGGVVTREPALFGDTVYAFVKDPDGYVFDIVQKASTPEPLCHIMFRVGDLDRTIKFYEKALGLKLVKKFDIPQEKITLAIIGYGEEPERVVFELLYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVVKIVTQELGGKITRQPGPIPGINTKITSFLDPDGWKIVLVDNQDFLKELE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09945 285 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 145 IPR029068 -
Vifa1g09945 285 ProSitePatterns Glyoxalase I signature 1. 24 45 IPR018146 GO:0004462|GO:0046872
Vifa1g09945 285 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 149 277 IPR037523 -
Vifa1g09945 285 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 143 IPR037523 -
Vifa1g09945 285 NCBIfam lactoylglutathione lyase 22 145 IPR004361 GO:0004462|GO:0046872
Vifa1g09945 285 Gene3D - 146 285 IPR029068 -
Vifa1g09945 285 PANTHER LACTOYLGLUTATHIONE LYASE 5 285 - -
Vifa1g09945 285 ProSitePatterns Glyoxalase I signature 1. 152 173 IPR018146 GO:0004462|GO:0046872
Vifa1g09945 285 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 150 277 IPR029068 -
Vifa1g09945 285 Gene3D - 1 145 IPR029068 -
Vifa1g09945 285 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 272 IPR004360 -
Vifa1g09945 285 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 22 139 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09945 Vifa-Chr1 1627094631 1627096289 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09945 152 276 Calmodulin-binding Proteins AT1G08110 28.000 3.52e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09945 K01759 - gmx:100799447 482.256