Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09926 ATGGATAAGGTTTTGGCACTTGACAAAGCTTACCCACTTCCATTATTAGGAGCAATGCTTGAAAAATATCCCGCTAAATTTGAGCCTGCTGTTTGGTGGCCTTCCAACAAAGGAAAACCACAAAGCAAGAAAATGGGGAAAATGAATAATGGATGGAGTGAAGAATTAGAAATGGAAATGCGGGAAGTTGTTGAAGTGATAAAGAGAAAGGATGCCGAAGATTATAACAGACTTGGAAACATAGCGTTGAAGATAAACAAGAGTTTGGCAATTGCAGGTCCATTACTCACAGGCATTGCAGCTGTTGGATCTACATTTATAGGCAATAATGGTAGTTCTTTGGCTGCTTTTGTTCCTCTCATGGCTGGTTCATTGGCTGCTGCAATTAATACTTTCCAACATGGTGGCCAAGTTGGCATGGTTTTTGAAATGTATAGAGGTTCTGCTGGTTTCTTCAACTTTTTAGAAACCTCAATTGAATCAACTTTAAGTGAGAAAGATTTAGCGAAAAGAGAAAATGGAGAGTTGTTTGAAATGAAGATGGCTCTGAAGTTGGGAAGAAGTATATCAAATCTGAGGGAACTTGCATCAAAATCAGCTTCTTATAGAATGGAAGGTGTGGGTGACATGGGTGAATTTGCCAGCAAACTCTTCTAA 657 0.3912 MDKVLALDKAYPLPLLGAMLEKYPAKFEPAVWWPSNKGKPQSKKMGKMNNGWSEELEMEMREVVEVIKRKDAEDYNRLGNIALKINKSLAIAGPLLTGIAAVGSTFIGNNGSSLAAFVPLMAGSLAAAINTFQHGGQVGMVFEMYRGSAGFFNFLETSIESTLSEKDLAKRENGELFEMKMALKLGRSISNLRELASKSASYRMEGVGDMGEFASKLF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09926 218 Pfam Petal formation-expressed 1 193 IPR027949 -
Vifa1g09926 218 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 1 218 IPR027949 -
Vifa1g09926 218 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09926 Vifa-Chr1 1623546364 1623547020 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09926 - - lja:Lj6g3v1838430.1 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09926 1 1623546364 1623547020 Vifa1g09926 1 1623546364 1623547020 ECH
Vifa4g05069 4 1587769113 1587770344 Vifa1g09926 1 1623546364 1623547020 PCT