Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09855 ATGGACTTCTCAAGGGAAAAGTTATCTTATAACAGTGCTATGTGTGAAAGAAATATGGTGAGCATATATGTTGTAAAGAATATTGACGATGTCGACAGAATCATGGATGAGATAAATGAACAGACTGAGAACATGAAGCAGATTCAAGAAGCATTTGTTATGTCGGTTGCAATAGGTACTTTGGATGGTATCATTGATACAATTTCGACGAATCATCCAATCTTACCTCTAATTAGGTTACTGAAGTCTCATGGAAAACTTATAATGGTTGGTGCACCAGAGAAGCTTTTGGAGCTTCTTGTCTTTCCATTACTTCAAGTCATTCCTGTGGAGTATGTTAAAACTGCAATGGAAAGACTCCTCAAAGCAGATGTCAAATATCGATTTGTGATTGACATTGGAAACACTTTGAAACCAAGTTCTTAA 426 0.3615 MDFSREKLSYNSAMCERNMVSIYVVKNIDDVDRIMDEINEQTENMKQIQEAFVMSVAIGTLDGIIDTISTNHPILPLIRLLKSHGKLIMVGAPEKLLELLVFPLLQVIPVEYVKTAMERLLKADVKYRFVIDIGNTLKPSS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09855 141 Coils Coil 31 51 - -
Vifa1g09855 141 PANTHER ALDEHYDE REDUCTASE 54 105 IPR047109 GO:0016616
Vifa1g09855 141 Gene3D - 50 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09855 Vifa-Chr1 1606518220 1606520066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09855 46 140 Monolignol Biosynthesis Gene Families AT4G37990 46.875 1.78e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09855 - K23232 fve:101297378 124.02