Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09808 ATGTACGTCGCCACTTGCGAGATTAACTATCCTCTATCAGATTTTGGGACGTTGGCGTCGATGTTGTGGAGATATCAAAAAGCATCAAAATTTCAAATTTTTAATGGCTTCAACTCTACATTGCGGCTTGGAAATGTTGGAAAACGAAGGGATGTTGGTTTAAACCATATTGCCCTCTTTGAAGGGAAAGCAGCGGGTGGTATTGGAGAGCAAGTGGGTGTAGAGTGTGATTATAGGCACAATGAGATTGTGAGGCTTAACCCGAGGGATTGCTGGTACTGGTTATCGGTGAATTGTCTTAATCTGACTTGTGCTTTTCGACATCCTGTTAATGTTTACCGATGA 345 0.4232 MYVATCEINYPLSDFGTLASMLWRYQKASKFQIFNGFNSTLRLGNVGKRRDVGLNHIALFEGKAAGGIGEQVGVECDYRHNEIVRLNPRDCWYWLSVNCLNLTCAFRHPVNVYR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09808 114 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 73 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09808 Vifa-Chr1 1594795314 1594796306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09808 33 84 Cell Wall Biosynthesis AT3G07160 58.333 6.23e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09808 - - atri:130828858 80.8777