Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09732 ATGGCAGAAGAAGAAGAACTGAACCAGTCTCTTGAATATACACCAACATGGATTGTTGCAGTTGTTTGCTCCGTCATTGTTTTCATCTCTCTATGCGTTGAGCGTGCTATTCACGGCCTTGGAAAGTACTTAAAGAGGAAAAATCAGACAGCATTATATAGAGCCTTAACAAAATTGGAAGAAGAGTTGATGCTTTTAGGGTTCATTTCCCTTCTCTTAACCGTATTTCAAGGTCTAATAAGCCACATTTGCATCCCACCTAAGTATGCAACCCAAATGCTTCCATGCAAGAGGTCTCAAGGATCTTCACAGGGTTCGGAGCATGATCTGATATACTATGATACTATAATCAACAGAAGAAGGCTTCTATCTACAGATACTGGTTCGCAGCATTGTAGACTGGAGGGGAAGGTACCGTTGTTATCACTGGAAGGATTGCATCATCTTCACATTTTCATCTTTGTATTGGCTGTTGTACATGTAGTATTCTGTGTCGCAACAATGATTCTTGGAGGTGCAAGGATTCGTCAGTGGAAAAGCTGGGAGGATCATGCTAGGAAGAAGACAATAAACTCAAGTGGAGAAACTCTTAGATTAGAGATAGACGAGTTCTTCAATAAACATGCTCAAGGGTATTGGAGAAAAGCAGCTGTTGTTGGTTGGCTCAGATCATTTTTCAAACAATTTTTTTCCTCAGTTACAAAATATGACTACCTTGCACTGCGGCATGGATTTATCAAGGAACACTTTCCAAACGATCCCAATTTTAATTTTCATAAGTACATGATGCGGACACTTGAAGTCGACTTCAAAAAAGTTGTAGGCATAAGCTGGTACCTGTGGGTCTTTGTCGTGCTGTTTTTGCTGCTGAATCTTGACGGGTGGCACACTTATTTCTGGTTGGCCTTTTTACCATTGATAATACTACTTCTTGTGGGGGCAAAGTTAGAGCACATAATCACTCGTTTAGGCCAGGAGTCGGTAGCAAAGGAATATCCAACTGAACGAGTGAAGCCATCGGACGAATACTTTTGGTTTGGCCGTCCGGCCATTGTCCTCGACTTACTTCACTTCACTTTGTTTCAAAATGCTTACGAGATCGCATTTTTCTTTTGGATTTGGTCGACGTATGGATTCGATTCATGCATTATGGAGAAAATCGCCTACATCATCCCAAGAATTATAATGGGTGTAATTGTTCAAGTGCTTTGCAGTTACAGCACCTTACCTCTTTACACCCTTGTGACTCAGATGGGTAGCAGTTGCAAGATTGATAAGTATGATGATAAGGGGGAATCACCTCCATTGTTCCAAAGAATGACCAAAGAATCAAACCAAGTTTCTCAAATTGGTGAACAAGCAATTATCATGATGGAAGATCATGCAATGTCATCTACAGTCGAACTTCAACGTATGCATCAATCTTCTTTGGAAAGAGATAATGTTTTCAATACTCAATAG 1461 0.4045 MAEEEELNQSLEYTPTWIVAVVCSVIVFISLCVERAIHGLGKYLKRKNQTALYRALTKLEEELMLLGFISLLLTVFQGLISHICIPPKYATQMLPCKRSQGSSQGSEHDLIYYDTIINRRRLLSTDTGSQHCRLEGKVPLLSLEGLHHLHIFIFVLAVVHVVFCVATMILGGARIRQWKSWEDHARKKTINSSGETLRLEIDEFFNKHAQGYWRKAAVVGWLRSFFKQFFSSVTKYDYLALRHGFIKEHFPNDPNFNFHKYMMRTLEVDFKKVVGISWYLWVFVVLFLLLNLDGWHTYFWLAFLPLIILLLVGAKLEHIITRLGQESVAKEYPTERVKPSDEYFWFGRPAIVLDLLHFTLFQNAYEIAFFFWIWSTYGFDSCIMEKIAYIIPRIIMGVIVQVLCSYSTLPLYTLVTQMGSSCKIDKYDDKGESPPLFQRMTKESNQVSQIGEQAIIMMEDHAMSSTVELQRMHQSSLERDNVFNTQ 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09732 486 Pfam Mlo family 9 432 IPR004326 GO:0006952|GO:0016020
Vifa1g09732 486 PANTHER MLO-LIKE PROTEIN 1 9 443 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09732 Vifa-Chr1 1575022546 1575025539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09732 10 430 MLO family AT4G02600 55.682 2.06e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09732 K08472 K01179 gmx:100792763 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09732 1 1575022546 1575025539 Vifa1g09732 1 1575022546 1575025539 ECH