Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09731 ATGGCAGAAGAAGAAGAACTGAACCAGTCTCTTGAATATACACCAACATGGATTGTTGCAGTTGTTTGCTCCGTCATTGTTTTCATCTCTCTATGCGTTGAGCGTGCTATTCACGGCCTTGGAAAGTACTTAAAGAGGAAAAATCAGACAGCATTATATAGAGCCTTAACAAAATTGGAAGAAGAGTTGATGCTTTTAGGGTTCATTTCCCTTCTCTTAACCGTATTTCAAGGTCTAATAAGCCACATTTGCATCCCACCTAAGTATGCAACCCAAATGCTTCCATGCAAGAGGTCTCAAGGATCTTCACAGGGTTCGGAGCATGATCTGATATACTATGATACTATAATCAACAGAAGAAGGCTTCTATCTACAGATACTGGTTCGCAGCATTGTAGACTGGAGGGGAAGGTACCGTTGTTATCACTGGAAGGATTGCATCATCTTCACATTTTCATCTTTGTATTGGCTGTTGTACATGTAGTATTCTGTGTCGCAACAATGATTCTTGGAGGTGCAAGGATTCGTCAGTGGAAAAGCTGGGAGGATCATGCTAGGAAGAAGACAATAAACTCAAGTGGAGAAACTCTTAGATTAGAGATAGACGAGTTCTTCAATAAACATGCTCAAGGGTATTGGAGAAAAGCAGCTGTTGTTGGTTGGCTCAGATCATTTTTCAAACAATTTTTTTCCTCAGTTACAAAATATGACTACCTTGCACTGCGGCATGGATTTATCAAGGAACACTTTCCAAACGATCCCAATTTTAATTTTCATAAGTACATGATGCGGACACTTGAAGTCGACTTCAAAAAAGTTGTAGGCATAAGCTGGTACCTGTGGGTCTTTGTCGTGCTGTTTTTGCTGCTGAATCTTGACGGGTGGCACACTTATTTCTGGTTGGCCTTTTTACCATTGATAATACTACTTCTTGTGGGGGCAAACCATCGGACGAATACTTTTGGTTTGGCCGTCCGGCCATTGTCCTCGACTTACTTCACTTCACTTTGTTTCAAAATGCTTACGAGATCGCATTTTTCTTTTGGATTTGGTGTAATTGTTCAAGTGCTTTGCAGTTACAGCACCTTACCTCTTTACACCCTTGTGACTCAGATGGGTAGCAGTTGCAAGATTGATAAGTATGATGATAAGGGGGAATCACCTCCATTGTTCCAAAGAATGACCAAAGAATCAAACCAAGTTTCTCAAATTGGTGAACAAGCAATTATCATGATGGAAGATCATGCAATGTCATCTACAGTCGAACTTCAACGTATGCATCAATCTTCTTTGGAAAGAGATAATGTTTTCAATACTCAATAG 1323 0.4021 MAEEEELNQSLEYTPTWIVAVVCSVIVFISLCVERAIHGLGKYLKRKNQTALYRALTKLEEELMLLGFISLLLTVFQGLISHICIPPKYATQMLPCKRSQGSSQGSEHDLIYYDTIINRRRLLSTDTGSQHCRLEGKVPLLSLEGLHHLHIFIFVLAVVHVVFCVATMILGGARIRQWKSWEDHARKKTINSSGETLRLEIDEFFNKHAQGYWRKAAVVGWLRSFFKQFFSSVTKYDYLALRHGFIKEHFPNDPNFNFHKYMMRTLEVDFKKVVGISWYLWVFVVLFLLLNLDGWHTYFWLAFLPLIILLLVGANHRTNTFGLAVRPLSSTYFTSLCFKMLTRSHFSFGFGVIVQVLCSYSTLPLYTLVTQMGSSCKIDKYDDKGESPPLFQRMTKESNQVSQIGEQAIIMMEDHAMSSTVELQRMHQSSLERDNVFNTQ 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09731 440 PANTHER MLO-LIKE PROTEIN 1 350 398 IPR004326 GO:0006952|GO:0016020
Vifa1g09731 440 Pfam Mlo family 9 315 IPR004326 GO:0006952|GO:0016020
Vifa1g09731 440 Pfam Mlo family 334 386 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09731 Vifa-Chr1 1575022546 1575025539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09731 10 384 MLO family AT4G02600 46.136 3.46e-122 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09731 K08472 K01179 gmx:100792763 519.235