Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09718 ATGGGCTCTGTTTCTTCAGAACTGAGTTTAGATTTAACACCCACCTTCCAACGGCCAAACATCATGTCAACACCATCATCCTTCAATCCTCATCATCGTTCTCATCGCAAGCTTCAGCTCGATGCCGCAACTTCGCCACTTTTCGTGCTTCCGTTGTCAACAAAAACAGTAGACCTCACTCCTTCAATCGTTACATCACCTTCAACGTTCACAAACAAAATCACCGTGCCGACATTAGCAACTCGATCCAGTTCAGTTTTTTCCATTTCCGATTCAACAACTTCGACAACAACACTGAACCAACAACAACGTGTCACTATTAAAGTTGTTCTCGGAATAACATCATTGCTCATGGAAAGACTATGCAGGAAGCGAGGGGCTGGTTTTCTGTGGGGACACTCAAATATCTCTATGACTATTTGCTTTATTTCAATGTTAGTATTAACCTATGCGGCTAAGAGCATTGGCTACGTAGAAAAAGGTCTACCACCACCCACAGGCATTGTGATCGCAGCGTTAGCAATCTTTACAATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTCCCATATGCCTTAATTTCCACACATATTGAACCATTGGGACTTGGCCAAGGGTTGTCAATGGGTGTTCTGAATCTGGCAATAGTGGTCCCGCAGATCATAGTGTCCTTGGGAAGTGGACCATGGGATCAGTTATTCGTTGGAGGAAACTCTCCAACCTTTGCCGTGGCAGCAGTTGCTGCTCTTTTGAGTGGACTCTTAGCTTTATTAGCTATTCCCCGAACTGTTATTGTCTCTGTTGCCTTATTCTTGAGTTTTCCTCTCCTCAAAATTTCAACCACCCTACCTCACCGAAAAAACCGTCGGCAGTACTCCCTCCGTTTGTGCACTACAATTCCCTCGCCGGCACGTACTCCCTCCATTTTGCGTCCTACAGCTCTAGCCTCCGGCGATACTCCCTCTGTTGGCTTCCTACAGCTCCGGCCTCCTTCAACCTCTTCAATTCTCCAATTCTCTAATTCTCCAATTCTTGAGGTAAGAACTGAGTTTAGATTTAACACCCACCTTCCAACGGCCAAACATCATGTCAACACCATCATCCTTCAATCGTCCAGTTCCCCTGTTCCCTCTTCATACGAATTCATTCATCGCCATCATCAACTTCTAACTCCCTTCGCAGCTCATCATCGTTCTCATCGCAAGCTTCAGCTCGATGCCGCAACTTTGCCACTTTTCGTGCTTCCGTTGTCAACAACAATAGTAGACCTCACTCCTTCAATCGTTACATCACCTTCAATGTTTACAAACAAAATCGCCGTGCCGACATTAGCAACTCGATCCAGTTCAGTTTTTTCCATTTCCGATTCAACAACTTCGACAACAACACTGAACCAACAACAACGTGTCACTATTAAAGTTGTTCTCGGAATAACATCATTGCTCATGGAAAGACTATGCAGGAAGCGAGGGGCTGGTTTTCAGTGGGGACTCTCAAATATCTCTATGACTATTTGCTTTATTTCAATGTTAGTATTAACCTATGCGGCTAAGAGCATTGGCTACGTAGAAAAAGGTCTACCACCACCCACAGGCATTGTGATCGCAGCGTTAGCAATCTTTACAATTCTTGGGTTTCCACTGGAAATCACTTACAGTGTCCCATATGCCTTAATTTCCACACATATAGAACCATTGGGACTTGGCCAAGGGTTGTCAATGGGTGTTCTGAATCTGGCAATAGTGGTCCCGCAGATCATAGTGTCCTTGGGAAGTGGACCATGGGATCATTTATTCCGTGGAGGAAACTCTCCAACCTTTGCCGTGGCAGCAGTTGCTGCTCTTTTGAGCGGACTCTTAGCTTTATTAGCTATTCCCCGAACTGGTACGCAGAAGACTCGAAGCCGTGTATGA 1914 0.4525 MGSVSSELSLDLTPTFQRPNIMSTPSSFNPHHRSHRKLQLDAATSPLFVLPLSTKTVDLTPSIVTSPSTFTNKITVPTLATRSSSVFSISDSTTSTTTLNQQQRVTIKVVLGITSLLMERLCRKRGAGFLWGHSNISMTICFISMLVLTYAAKSIGYVEKGLPPPTGIVIAALAIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVVPQIIVSLGSGPWDQLFVGGNSPTFAVAAVAALLSGLLALLAIPRTVIVSVALFLSFPLLKISTTLPHRKNRRQYSLRLCTTIPSPARTPSILRPTALASGDTPSVGFLQLRPPSTSSILQFSNSPILEVRTEFRFNTHLPTAKHHVNTIILQSSSSPVPSSYEFIHRHHQLLTPFAAHHRSHRKLQLDAATLPLFVLPLSTTIVDLTPSIVTSPSMFTNKIAVPTLATRSSSVFSISDSTTSTTTLNQQQRVTIKVVLGITSLLMERLCRKRGAGFQWGLSNISMTICFISMLVLTYAAKSIGYVEKGLPPPTGIVIAALAIFTILGFPLEITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVVPQIIVSLGSGPWDHLFRGGNSPTFAVAAVAALLSGLLALLAIPRTGTQKTRSRV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09718 637 MobiDBLite consensus disorder prediction 15 29 - -
Vifa1g09718 637 SUPERFAMILY MFS general substrate transporter 110 264 IPR036259 -
Vifa1g09718 637 SUPERFAMILY MFS general substrate transporter 474 629 IPR036259 -
Vifa1g09718 637 MobiDBLite consensus disorder prediction 15 36 - -
Vifa1g09718 637 PANTHER SUGAR TRANSPORTER 108 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09718 Vifa-Chr1 1571358148 1571369415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09718 474 632 Sucrose Transporter Gene Family AT1G09960 64.780 7.41e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09718 K15378 - gmx:100820483 248.44