LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g09693	ATGAACCCCCTTCGTCTCATAGGCACAGCTCTATGCTGTGTTGCAATTGTGTTTGGAGGATTAACTTTCTCCTCAGATGCACAACTTGACCCAAATTTTTACATTCGAAGTTGTCCTCAATTGCAGTCTATAGTATATCAAATCTTATCCAATGTTGCTACAAAGGATCCACGAATGCCAGCTAGTCTCATCAGGCTCCACTTTCATGATTGCTTTGTTCAAGGTTGTGATGCATCAGTTTTGTTGAACACAACGGATACCATTGTCACTGAACAAGATGCTTTACCAAATATCAACTCCTTGAGAGGTTTAGATGTTATAAATCAGATCAAAACAGCCATAGAAATAGCTTGTCCCCACACTGTTTCTTGTGCTGATATTCTTACACTTTCTGCTGAAATATCTTCCGTTTTGACGGGAGGGCCAGGTCCATCTTTCAGTTTAACTCAACTTAAATCTGCTTTTGCTGATCAAGGCCTCACCACACGTGACCTAGTATCACTCTCAGGTGCTCATACATTTGGAAAATCACGTTGCTTTTTATTCTCTGATCGATTATACAACTTCAACAATACTGGCAAACCTGATCCAACTCTTGATACAACATACTTAAAAGAATTGCAAAAACAGTGTCCTGAGGACGGACCGGGAGATAACCGTGTCAATTTTGATCCAACTACTCCTAATAGATTGGACAAAAACTACTACAACAATCTTCAAGTTAAAAAGGGTTTGCTTCAAAGTGATCAAGAATTGTTCTCAACTCCAGGTGCAGATACTATTGCCATTGTCAACCGTTTTGCCAATAACAAAATTGTTTTCTTTAAGAATTTTAAGAAGTCAATGATTAAAATGGGAAATATTGGCGTGCTTACCGGAACGAAAGGTGAAATTAGAAAACAATGCAATTTTATTAACAAGGAATCTTCTGAATTGGATCTTGCTACTGTGACTTCTACAGAATCAATTGAGGGGGGTGTGGTTAGTTCAATCTAA	996	0.3835	MNPLRLIGTALCCVAIVFGGLTFSSDAQLDPNFYIRSCPQLQSIVYQILSNVATKDPRMPASLIRLHFHDCFVQGCDASVLLNTTDTIVTEQDALPNINSLRGLDVINQIKTAIEIACPHTVSCADILTLSAEISSVLTGGPGPSFSLTQLKSAFADQGLTTRDLVSLSGAHTFGKSRCFLFSDRLYNFNNTGKPDPTLDTTYLKELQKQCPEDGPGDNRVNFDPTTPNRLDKNYYNNLQVKKGLLQSDQELFSTPGADTIAIVNRFANNKIVFFKNFKKSMIKMGNIGVLTGTKGEIRKQCNFINKESSELDLATVTSTESIEGGVVSSI	331

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g09693	331	FunFam	Peroxidase	142	285	-	-
	Vifa1g09693	331	Pfam	Peroxidase	141	270	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vifa1g09693	331	PRINTS	Haem peroxidase superfamily signature	60	74	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vifa1g09693	331	PRINTS	Haem peroxidase superfamily signature	164	179	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vifa1g09693	331	PRINTS	Haem peroxidase superfamily signature	224	239	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vifa1g09693	331	CDD	secretory_peroxidase	28	305	IPR033905	GO:0004601\|GO:0042744
	Vifa1g09693	331	ProSiteProfiles	Plant heme peroxidase family profile.	28	306	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vifa1g09693	331	PRINTS	Plant peroxidase signature	121	131	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vifa1g09693	331	PRINTS	Plant peroxidase signature	222	237	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vifa1g09693	331	PRINTS	Plant peroxidase signature	238	255	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g09693	Vifa-Chr1	1562321456	1562322878	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa1g09693	15	331	Peroxidase	AT2G38390	49.855	1.11e-112	329

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g09693	K00430		-	gmx:100804765	442.58

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