Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09693 ATGAACCCCCTTCGTCTCATAGGCACAGCTCTATGCTGTGTTGCAATTGTGTTTGGAGGATTAACTTTCTCCTCAGATGCACAACTTGACCCAAATTTTTACATTCGAAGTTGTCCTCAATTGCAGTCTATAGTATATCAAATCTTATCCAATGTTGCTACAAAGGATCCACGAATGCCAGCTAGTCTCATCAGGCTCCACTTTCATGATTGCTTTGTTCAAGGTTGTGATGCATCAGTTTTGTTGAACACAACGGATACCATTGTCACTGAACAAGATGCTTTACCAAATATCAACTCCTTGAGAGGTTTAGATGTTATAAATCAGATCAAAACAGCCATAGAAATAGCTTGTCCCCACACTGTTTCTTGTGCTGATATTCTTACACTTTCTGCTGAAATATCTTCCGTTTTGACGGGAGGGCCAGGTCCATCTTTCAGTTTAACTCAACTTAAATCTGCTTTTGCTGATCAAGGCCTCACCACACGTGACCTAGTATCACTCTCAGGTGCTCATACATTTGGAAAATCACGTTGCTTTTTATTCTCTGATCGATTATACAACTTCAACAATACTGGCAAACCTGATCCAACTCTTGATACAACATACTTAAAAGAATTGCAAAAACAGTGTCCTGAGGACGGACCGGGAGATAACCGTGTCAATTTTGATCCAACTACTCCTAATAGATTGGACAAAAACTACTACAACAATCTTCAAGTTAAAAAGGGTTTGCTTCAAAGTGATCAAGAATTGTTCTCAACTCCAGGTGCAGATACTATTGCCATTGTCAACCGTTTTGCCAATAACAAAATTGTTTTCTTTAAGAATTTTAAGAAGTCAATGATTAAAATGGGAAATATTGGCGTGCTTACCGGAACGAAAGGTGAAATTAGAAAACAATGCAATTTTATTAACAAGGAATCTTCTGAATTGGATCTTGCTACTGTGACTTCTACAGAATCAATTGAGGGGGGTGTGGTTAGTTCAATCTAA 996 0.3835 MNPLRLIGTALCCVAIVFGGLTFSSDAQLDPNFYIRSCPQLQSIVYQILSNVATKDPRMPASLIRLHFHDCFVQGCDASVLLNTTDTIVTEQDALPNINSLRGLDVINQIKTAIEIACPHTVSCADILTLSAEISSVLTGGPGPSFSLTQLKSAFADQGLTTRDLVSLSGAHTFGKSRCFLFSDRLYNFNNTGKPDPTLDTTYLKELQKQCPEDGPGDNRVNFDPTTPNRLDKNYYNNLQVKKGLLQSDQELFSTPGADTIAIVNRFANNKIVFFKNFKKSMIKMGNIGVLTGTKGEIRKQCNFINKESSELDLATVTSTESIEGGVVSSI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09693 331 FunFam Peroxidase 142 285 - -
Vifa1g09693 331 Pfam Peroxidase 141 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Haem peroxidase superfamily signature 164 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 CDD secretory_peroxidase 28 305 IPR033905 GO:0004601|GO:0042744
Vifa1g09693 331 ProSiteProfiles Plant heme peroxidase family profile. 28 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Plant peroxidase signature 222 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Plant peroxidase signature 238 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 PRINTS Plant peroxidase signature 280 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 Gene3D - 286 306 - -
Vifa1g09693 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 164 174 IPR019793 -
Vifa1g09693 331 Gene3D Peroxidase, domain 2 143 285 - -
Vifa1g09693 331 SUPERFAMILY Heme-dependent peroxidases 28 306 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g09693 331 Gene3D - 32 142 - -
Vifa1g09693 331 PANTHER PEROXIDASE 72-RELATED 142 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09693 Vifa-Chr1 1562321456 1562322878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09693 15 331 Peroxidase AT2G38390 49.855 1.11e-112 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09693 K00430 - gmx:100804765 442.58