Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09687 ATGAACTCCTTTGGTCTCACATTGACAGCTCTAAGCTGTGTAGTGGTTGTGCTTGGAGGCTTACCCTTCTCTTGTAATGCACAACTTGATGCATCTTTTTACAGAAACACTTGTCCAGATGTTCATTCCATTGTTCGTGAAGTCATAAGAAATGTTTCCAAGACAGATCCTAGAATGCTTGCTAGCCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGTTGTGATGCATCTGTTTTGCTGAACAAAACTGATACCGTTGTGACTGAACAAGAAGCTTTCCCTAATATCAACTCTTTAAGAGGCTTAGATGTTATAAATCGGATCAAAACAGCAGTGGAAGATGCCTGTCCTAACACTGTTTCTTGTGCTGATATTCTTGCTCTTTCTGCACAAATTTCCTCTATTTTGGCACAAGGTCCTAATTGGAAAGTTCCATTAGGAAGAAGAGATGGTTTAACAGCCAACCAATCACTTGCTAATAAAAATCTTCCGGCTCCTTTCAACACATTAGATGAACTCAAAGCTGCATTTGCTAAACAAGGCCTCAACCCTACTGATCTAGTTGCTCTTTCCGGCGCTCACACATTTGGAAGAGCTCACTGTTCCTTATTCGTCGATCGTTTATACAACTTCAGCAACACAGGAAAGCCTGATCCATCCCTCAACACAACTTACTTACAAGAGTTACGCAAAACATGCCCTAAGGGTGGAAGTGGAACAAACCTAGCGAACTTCGACCCTACTACTCCTGATAGATTTGACAAGAACTACTACTCTAATCTTCAGGTTAAGAAGGGTTTGCTTCAGAGTGATCAAGAGCTTTTCTCAACTTCTGGTGCGGATACTATTAGCATTGTGAACAAGTTTAGTGCTGACAAAAATGCTTTCTTTGATAGCTTTGAGACAGCGATGGTTAAAATGGGAAATATTGGTGTGCTTACTGGGAACAAAGGAGAGATTAGAAAACATTGCAATTTTGTTAACAAAGATCGTATCAGAAAGGCTTCTAGTGATTCATCAGAATCTGGTATGATTAGTTCAATTTAA 1053 0.4008 MNSFGLTLTALSCVVVVLGGLPFSCNAQLDASFYRNTCPDVHSIVREVIRNVSKTDPRMLASLVRLHFHDCFVQGCDASVLLNKTDTVVTEQEAFPNINSLRGLDVINRIKTAVEDACPNTVSCADILALSAQISSILAQGPNWKVPLGRRDGLTANQSLANKNLPAPFNTLDELKAAFAKQGLNPTDLVALSGAHTFGRAHCSLFVDRLYNFSNTGKPDPSLNTTYLQELRKTCPKGGSGTNLANFDPTTPDRFDKNYYSNLQVKKGLLQSDQELFSTSGADTISIVNKFSADKNAFFDSFETAMVKMGNIGVLTGNKGEIRKHCNFVNKDRIRKASSDSSESGMISSI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09687 350 FunFam Peroxidase 32 178 - -
Vifa1g09687 350 PANTHER PEROXIDASE 72-RELATED 26 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 Gene3D - 33 330 - -
Vifa1g09687 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vifa1g09687 350 Gene3D Peroxidase, domain 2 166 309 - -
Vifa1g09687 350 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 FunFam Peroxidase 166 309 - -
Vifa1g09687 350 Pfam Peroxidase 45 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09687 350 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09687 Vifa-Chr1 1561375664 1561376994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09687 9 350 Peroxidase AT2G38390 54.986 5.51e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09687 K00430 - gmx:547499 516.153