Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09681 ATGGTGGACCTGAGTGACCAAGAGCTTTTTTCCACTACTGGTGCTGATACTATTGCTATTGTCAATAGTTTCATCAATAATCAAACTCTCTTCTTTGAAAACTTTGTGTCATCAATGATAAAAATGGGAAATCTTGGAGTTTTGACTGGAACTCAAGGTGAAATTCGAACACAATGTAATGCTGTGAATGGGAATTCTTCTTCTGGTTTGGCTTCTGTGGTTACCAATGAATCATCCGAAGATGGCTTGGCTAGCTCATTCTGA 264 0.3864 MVDLSDQELFSTTGADTIAIVNSFINNQTLFFENFVSSMIKMGNLGVLTGTQGEIRTQCNAVNGNSSSGLASVVTNESSEDGLASSF 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09681 87 Gene3D - 43 63 - -
Vifa1g09681 87 Gene3D Peroxidase, domain 2 5 42 - -
Vifa1g09681 87 ProSiteProfiles Plant heme peroxidase family profile. 5 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g09681 87 SUPERFAMILY Heme-dependent peroxidases 5 63 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g09681 87 PANTHER PEROXIDASE 72-RELATED 5 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09681 Vifa-Chr1 1559311304 1559311659 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09681 5 68 Peroxidase AT5G06730 68.750 6.54e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09681 K00430 - gmx:112997600 125.176