Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g09658 | ATGAAGCTCTTTACTCTTTTTGTGTTATCTTTATCTTTCTTTACCATTATGGGGCAGCTTCCTTCACAGGACATTTTAGCATTGTTGGAGTTTAAGAAATGCATCAAGCATGACCCTACTGGTTATGTCCTGAATTCGTGGAATGAAGAATCGATTGACTTTGACGGTTGTCCGTCTTCATGGAATGGTGTTCTTTGTAACGGTGGTAATGTTGCTGGTGTTGTCCTTGATAACTTAGGTCTCTCTGCCGATACGGATTTGAGTGTTTTTTCTAATCTGTCGAAGCTTGTGAAACTTTCCATGGCCAATAATTCCATATCAGGAAAATTACCCAACAATGTTGCCGATTTCAAAAGCATTGAGTTTCTTGATATTTCCAATAACCTCTTTTTTTCGTCCTTACCGGTTGGAATCGGTAAATTTGATAGCTTGCAGAATCTGTCATTGGCTGGAAATAACTTTTCCGGTCCAATTCCGAATTCTATTTCTGAGATGTCTTCCATCAAATCATTAGACTTGAGCCGTAACGCCCTTTCCGGAGCACTTCCGCAATCATTGACTAAACTGGATAGTCTTGTATCTCTTAATGTGTCTCGTAATGGCTTCACTGGAAAAATTCCCAGAGGTTTTGAGCTTATTTCCAACCTTGATAAACTCGACTTGCATGGGAATATGCTTGACGGTCCTTTAGATCTCGAGTTTATGCTTTTATCAGGTGCTAGCTATGTTGATTTAAGTGATAACATGCTGCTGAGTTCCGATTCCGGGAAATTTCTTCCACAAATATCTGAAAGTATTAAGTATATGAATCTTAGCCATAACCAGCTTACTGGTTCATTGGTTGGTGGAGCCGAACAACCTGTTTTCCAAAACTTGAAGGTGTTGGATCTCAGCTATAACCAATTGAATGGTGAATTACCTGGATTCGATTTTGTTTACGATCTCCAAACCCTTAAGCTTAGCAACAATAAGTTTTCAGGATTTATTCCTAGTGGCTTACTTAAAGGAGATTCTTTGGTTTTAACTGAACTTGATTTGAGCGCCAACAATCTTTCAGGACCACTGAGTATAATTACATCAACGACACTTCACTTTCTGAATATCTCATCAAATGGTTTCACTGGCCAGCTGCCGCCGCTGACTGGAAGTTGTGCTGTACTCGATCTGTCAAATAACAAATTTGAAGGAAATTTAACAAGGATGTTTAAATGGGGGAACATAGAATATCTTGATCTCAGTCGGAATCGTTTGACAGGGAACATCCCCGAGGTAACTCCTCAGTTTTTGCGATTGAGTTATTTGAACTTATCTGGTAATGATCTCGGTGACTCCCTTCCAAAAGTATTAACACGGTATCCGAAGCTTAGAGTGCTTGATATCAGTTCCAACCAATTAAAAGGCTTTCTTCTAGCAGAATTTTTCACAATGCCAACGTTACAAGAGCTTCATCTCGAAAATAATTTGATTGATGGTGGCATCAATTTATCGTCTACTCTTGACCAATCTCATCTTCAAGTTCTTGATCTTTCTCACAACCAGCTTAATAGCTTTTTTCCCGATAAATTTGGATCATTAACTAGCCTGAGAGTGCTCAATATCGCTGGAAATAAATTTGCTGGTTCTCTTCCAACTACTATTTCTGACATGAGTTCTCTAGACTCCTTGGATATATCGGATAATCGTTTTACCGGTCCACTTCCAAATAATATGCCAATTGGACTCAAATACTTCAATGCTTCAGAAAATGATCTATCTGGAGCTGTCCCAGAAATTCTTAGGAAGTTCCCTACTTCTTCTTTCTTTCCTGGAAATGACAAGTTACATTTTCCAAATGGTCCTCCTGGATCAACCGTTTCACCGGCCGATAGTTCCAAGGGGAGGAAGTCTATGACCACGGTTGTTAAGGTAATAATTATAGTCTCATGTGTGGTTGCTCTCTTCATATTAATCTTACTGGCTGTCTTCATACACTACATACGTATGTCAAGATCATCTACGCAAGAATATGATACAAGTAAGGATATCCACGGGCGCCCTCAACCGGTAATATCTGGACCTATTCGTCCGACAGAGAGAGGTGGCCCTTTGGTTGTATCGGCTGAAGATCTTGTATCCTCGCGTAAAGGTTCACCATCAGAAATAATTAGCCCCGATGAAAAAACTGCAGCCGTAGCTGGATTCTCCCCGTCAAAACACAGCCACTTTTCATGGTCACCAGGATCTGGCGATTCATTGACTGCCGAAAATCTTACAAGGCTAGATACGAGGTCTCCGGATAGGTTGATTGGTGAGCTGCATTTTCTTGATGATACAATATCGCTGTCACCTGAGGAGCTATCGAGGGCACCGGCTGAAGTTCTGGGAAGAAGTAGTCACGGTACTTCTTACAAAGCAACTTTGGATAATGGCGTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCAAAACAAAGAAAAGAATTTGTTAAAGAGATAAGAAAGTTTGCAAACATCAGGCATCCAAATGTCGTCGGTTTGAGAGGTTATTATTGGGGTCCTACGCAGCACGAGAAGCTCATTCTTTCAGATTACATTTCACCAGGAAGTCTTTCAAGTTTTCTTTATGATCGACCAGGGAGAAACGGTCCACCGTTAACATGGGCTCAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTCGACCGAGCTGTTCCTCACGGGAACCTTAAAGCTACAAACGTGCTGTTAGACACACCTGATATGAACGCACGTGTTGCTGATTATTGTCTTCACCGACTCATGACTCAAGCTGGTACTATTGAACAGATTCTTGATGCTGGTGTCTTGGGTTATCGTGCACCAGAGTTAGCTGCTTCCAAGAAGCCAATGCCGTCGTTCAAGTCAGATGTCTATGCTTTCGGCGTGATACTTTTGGAGCTTTTAACTGGAAGGTGTGCTGGTGATGTGGTATCCGGTGAGGAGGGAGGTGTTGATCTTACAGATTGGCTAAGATTGCGAGTAGCAGAAGGTCGAGGCTCGGAGTGTTTTGATTCTACTTTGATGTCAGAAATGGGAAATCCAGTGGTAGAAAAGGGAATGAAGGAGGTCTTAGGAATAGCGATCCGATGTATTCGATCGGTTTATGAAAGGCCTGGTATCAAGACTATATATGAAGATATTTCTTCTATATAG | 3192 | 0.4145 | MKLFTLFVLSLSFFTIMGQLPSQDILALLEFKKCIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSVFSNLSKLVKLSMANNSISGKLPNNVADFKSIEFLDISNNLFFSSLPVGIGKFDSLQNLSLAGNNFSGPIPNSISEMSSIKSLDLSRNALSGALPQSLTKLDSLVSLNVSRNGFTGKIPRGFELISNLDKLDLHGNMLDGPLDLEFMLLSGASYVDLSDNMLLSSDSGKFLPQISESIKYMNLSHNQLTGSLVGGAEQPVFQNLKVLDLSYNQLNGELPGFDFVYDLQTLKLSNNKFSGFIPSGLLKGDSLVLTELDLSANNLSGPLSIITSTTLHFLNISSNGFTGQLPPLTGSCAVLDLSNNKFEGNLTRMFKWGNIEYLDLSRNRLTGNIPEVTPQFLRLSYLNLSGNDLGDSLPKVLTRYPKLRVLDISSNQLKGFLLAEFFTMPTLQELHLENNLIDGGINLSSTLDQSHLQVLDLSHNQLNSFFPDKFGSLTSLRVLNIAGNKFAGSLPTTISDMSSLDSLDISDNRFTGPLPNNMPIGLKYFNASENDLSGAVPEILRKFPTSSFFPGNDKLHFPNGPPGSTVSPADSSKGRKSMTTVVKVIIIVSCVVALFILILLAVFIHYIRMSRSSTQEYDTSKDIHGRPQPVISGPIRPTERGGPLVVSAEDLVSSRKGSPSEIISPDEKTAAVAGFSPSKHSHFSWSPGSGDSLTAENLTRLDTRSPDRLIGELHFLDDTISLSPEELSRAPAEVLGRSSHGTSYKATLDNGVLLRVKWLREGVAKQRKEFVKEIRKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLSSFLYDRPGRNGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVVSGEEGGVDLTDWLRLRVAEGRGSECFDSTLMSEMGNPVVEKGMKEVLGIAIRCIRSVYERPGIKTIYEDISSI | 1063 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g09658 | 1063 | Gene3D | Ribonuclease Inhibitor | 287 | 619 | IPR032675 | - | |
Vifa1g09658 | 1063 | Gene3D | Phosphorylase Kinase; domain 1 | 773 | 858 | - | - | |
Vifa1g09658 | 1063 | ProSiteProfiles | Leucine-rich repeat profile. | 291 | 313 | IPR001611 | GO:0005515 | |
Vifa1g09658 | 1063 | MobiDBLite | consensus disorder prediction | 670 | 691 | - | - | |
Vifa1g09658 | 1063 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 356 | 613 | - | - | |
Vifa1g09658 | 1063 | SUPERFAMILY | RNI-like | 290 | 594 | - | - | |
Vifa1g09658 | 1063 | FunFam | Pollen receptor-like kinase 1 | 859 | 1063 | - | - | |
Vifa1g09658 | 1063 | SUPERFAMILY | L domain-like | 43 | 378 | - | - | |
Vifa1g09658 | 1063 | FunFam | Leucine-rich repeat receptor-like protein kinase | 766 | 858 | - | - | |
Vifa1g09658 | 1063 | ProSiteProfiles | Leucine-rich repeat profile. | 503 | 524 | IPR001611 | GO:0005515 | |
Vifa1g09658 | 1063 | ProSiteProfiles | Protein kinase domain profile. | 781 | 1063 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09658 | 1063 | MobiDBLite | consensus disorder prediction | 606 | 626 | - | - | |
Vifa1g09658 | 1063 | FunFam | LRR receptor-like serine/threonine-protein kinase GHR1 | 20 | 263 | - | - | |
Vifa1g09658 | 1063 | PANTHER | OS07G0626500 PROTEIN | 7 | 1063 | - | - | |
Vifa1g09658 | 1063 | Pfam | Leucine rich repeat | 143 | 201 | IPR001611 | GO:0005515 | |
Vifa1g09658 | 1063 | Pfam | Leucine rich repeat | 502 | 562 | IPR001611 | GO:0005515 | |
Vifa1g09658 | 1063 | Pfam | Leucine rich repeat N-terminal domain | 22 | 67 | IPR013210 | - | |
Vifa1g09658 | 1063 | SMART | LRR_typ_2 | 189 | 212 | IPR003591 | - | |
Vifa1g09658 | 1063 | SMART | LRR_typ_2 | 502 | 524 | IPR003591 | - | |
Vifa1g09658 | 1063 | SMART | LRR_typ_2 | 289 | 311 | IPR003591 | - | |
Vifa1g09658 | 1063 | SMART | LRR_typ_2 | 93 | 117 | IPR003591 | - | |
Vifa1g09658 | 1063 | SMART | LRR_typ_2 | 312 | 336 | IPR003591 | - | |
Vifa1g09658 | 1063 | SMART | LRR_typ_2 | 525 | 549 | IPR003591 | - | |
Vifa1g09658 | 1063 | SMART | LRR_typ_2 | 165 | 188 | IPR003591 | - | |
Vifa1g09658 | 1063 | Pfam | Leucine Rich repeat | 290 | 305 | IPR001611 | GO:0005515 | |
Vifa1g09658 | 1063 | Gene3D | Ribonuclease Inhibitor | 181 | 286 | IPR032675 | - | |
Vifa1g09658 | 1063 | Gene3D | Ribonuclease Inhibitor | 21 | 180 | IPR032675 | - | |
Vifa1g09658 | 1063 | SUPERFAMILY | Protein kinase-like (PK-like) | 784 | 1055 | IPR011009 | - | |
Vifa1g09658 | 1063 | Pfam | Protein tyrosine and serine/threonine kinase | 785 | 983 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g09658 | 1063 | Gene3D | Transferase(Phosphotransferase) domain 1 | 860 | 1063 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g09658 | Vifa-Chr1 | 1553237975 | 1553241430 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g09658 | 1 | 1051 | Receptor kinase-like Gene Family | AT1G55610 | 27.833 | 1.34e-80 | 284 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vifa1g09658 | PK_Tyr_Ser-Thr | 1.5e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g09658 | - | - | gmx:100793639 | 1737.62 |