Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g09621 | ATGATTCAACCACTCACAATATTTCATATCATTGTTTTAATAATATCTCCTTCACTGGCCTCGGCACAAGAAGATGGAATAGTTTCAGTCCCTTTCCCATTCGGAATGAATGAACCTCATTGCTATGCACACAAATGGTTTGAAATAGAATGCAAATTTGACAACAATACTTCTTCTGATGTTCCTAAACCTTACTTGAAGTCGTTAAATCTTCAAGTAATCTATTTTTACTCGTACATGAGCATGGTTGAGATTATGAACCCAATTTACCGTTCAAATTGTCAAAAAAACAAAATTAGCATCAACAATAGAAAAACCGTTAATCTTAGAGACAGTCCTTACATATTTTCACAGGCTGAAAACACGTTTCTAGCTGTGGGATGTAACAATCTTGCTTTTCTTCAGTCTAATGGGACAACCGTTGGTGGTTGTGTATCAATTTGTGACGACGACAACAACAAGAACAACAACAGTAACAATTTCAATTTTAATAGTGACGGTTGTAATGGAAGGTATTGTTGTGCAACCTCATTGCCTTCACATCTTTCAGAGTTTAACGCAACACTAAGAGGTTTAAGGGAACAGAGTAGTGATGGTTGTGGTTATGCTTTGATTACAAATGGTAACAGGATACTTTTTGACAGTTCGGATAATATGAACACGGATGATAATGAGACATTGAATGAATTGAAGAACATGGAATATGCTTCTGCAATGCTTGAGTGGGAGATTTTGAATGATATGTTAATTAATTCCACATTTCAACTACCTCCAAATTGTTACAACTCCAAGGTTACTTCTTTAAGTAACAGAACCACCGGTCAGCAATGTCGATGCTCGTCCGGGTTTTACTCTGACTATCTCTACGAAATCTATGGAAATCCATACCTTGGAGGCTGCCCAGTTCTAGAGCAAGACTTTTATAGGAATAATCGATGGAAGAAGTGGGTTATTGTAGGAATTTCATCAAGTCTCGGATCCATCGGTTTTCTCATTGGTTTATGGTTTTTGTACAAAGCTATGAAACGAAGAATGATTAAGAAACGCAGAGAAAAATTCTTCAAAAGAAACGGTGGTCTGCTGTTACAAAAAAGGATGTCTGCAGGAGAAGTAAATGTTGATAGAACTATTCTCTTCACCTTGAAGGATTTAAAGAAAGCCACTGATAATTTCAATAAGGATAGAATTCTTGGAAAGGGAGGCCAAGGTACAGTTTACAAAGGCATGCTGGTGGATGGTAAAATTGTTGCTGTGAAAAAGTTTAAGGTTGAAGGAAAGGTTGAAGAGTTCATCAATGAGTTTGTGATTCTTTCACAAATCAACAATAGAAATGTTGTCAGACTATTGGGATGTTGTTTGGAGACAGAAATTCCTTTGCTTGTTTATGAATTCATTCCCAATGGTAACCTTTTTGAGTATCTGCATGACCAAAATGAGGACATACCAATGACATGGGACATGCGTTTGAGAATTGCCTCTGAAGTTGCTGGTGCTATATTTTATTTGCACTCAGTTGCATCTCAGCCAATTTATCATAGAGACGTCAAATCAACAAATATACTATTGGATGAAAAGTATAGGGCAAAATTAGCAGATTTTGGAGCATCAAGAATAATTTCAATTGAAGCTACTCATCTTACCACAATGGTCCAAGGTACTTTTGGATACTTAGACCCTGAATATTTTTACACTAGTCAATTCACAGAGAAAAGTGATGTTTACAGCTTTGGAGTAGTCCTTGCTGAACTTTTAACTGGTAAGAAGCCAATATCTTCTGTAACAAGATCTGAGGATTCAAAAAATTTAGCTTCCTATTTTGTTCAGTGTATAGAGGAGAATATATTGTTTGACATTATTGACAAAAGGGTCATAGAAGGAGGAGAGAAAGAACATATCATTTCAGTTGCAAATCTTGCATATAGATGCTTAGAAATAAATGGAAGAAAACGACCAACCATGAAAGAAGTCACATTAGAATTGGAAGGGATTAGGGGATTCAATAAGAAGCTTAATGCACAACAAAATAACGAGGAAATTGAGTTTTCTGGAATCGAACAGTACCAACCTTGGGATGGGTTTTCTGCATCAAATTCATTATCAATTATCAGCAGCCAAACACACTCCACAGACTAG | 2133 | 0.3624 | MIQPLTIFHIIVLIISPSLASAQEDGIVSVPFPFGMNEPHCYAHKWFEIECKFDNNTSSDVPKPYLKSLNLQVIYFYSYMSMVEIMNPIYRSNCQKNKISINNRKTVNLRDSPYIFSQAENTFLAVGCNNLAFLQSNGTTVGGCVSICDDDNNKNNNSNNFNFNSDGCNGRYCCATSLPSHLSEFNATLRGLREQSSDGCGYALITNGNRILFDSSDNMNTDDNETLNELKNMEYASAMLEWEILNDMLINSTFQLPPNCYNSKVTSLSNRTTGQQCRCSSGFYSDYLYEIYGNPYLGGCPVLEQDFYRNNRWKKWVIVGISSSLGSIGFLIGLWFLYKAMKRRMIKKRREKFFKRNGGLLLQKRMSAGEVNVDRTILFTLKDLKKATDNFNKDRILGKGGQGTVYKGMLVDGKIVAVKKFKVEGKVEEFINEFVILSQINNRNVVRLLGCCLETEIPLLVYEFIPNGNLFEYLHDQNEDIPMTWDMRLRIASEVAGAIFYLHSVASQPIYHRDVKSTNILLDEKYRAKLADFGASRIISIEATHLTTMVQGTFGYLDPEYFYTSQFTEKSDVYSFGVVLAELLTGKKPISSVTRSEDSKNLASYFVQCIEENILFDIIDKRVIEGGEKEHIISVANLAYRCLEINGRKRPTMKEVTLELEGIRGFNKKLNAQQNNEEIEFSGIEQYQPWDGFSASNSLSIISSQTHSTD | 710 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g09621 | 710 | FunFam | Wall-associated receptor kinase 2 | 465 | 682 | - | - | |
Vifa1g09621 | 710 | Gene3D | Phosphorylase Kinase; domain 1 | 359 | 464 | - | - | |
Vifa1g09621 | 710 | FunFam | Wall-associated receptor kinase 2 | 361 | 464 | - | - | |
Vifa1g09621 | 710 | CDD | STKc_IRAK | 397 | 663 | - | - | |
Vifa1g09621 | 710 | SUPERFAMILY | Protein kinase-like (PK-like) | 376 | 658 | IPR011009 | - | |
Vifa1g09621 | 710 | SMART | serkin_6 | 391 | 663 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09621 | 710 | Gene3D | Transferase(Phosphotransferase) domain 1 | 465 | 687 | - | - | |
Vifa1g09621 | 710 | ProSiteProfiles | Protein kinase domain profile. | 391 | 663 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09621 | 710 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 28 | 674 | IPR045274 | GO:0007166 | |
Vifa1g09621 | 710 | Pfam | Protein kinase domain | 391 | 656 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g09621 | 710 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 510 | 522 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g09621 | Vifa-Chr1 | 1544686552 | 1544689544 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g09621 | 26 | 664 | Receptor kinase-like Gene Family | AT1G69730 | 43.213 | 4.47e-176 | 521 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vifa1g09621 | Pkinase | 8.8e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g09621 | - | - | mtr:11415953 | 963.37 |