Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09606 ATGAAGAGGAAACAGGAAGCACATTCTGCTGTGGGAATAGACCTTGGCACAACGTATTCATGTGTTGCAGTATGGCAAGAAGAACACTGTCGAGTTGAAATCATTCACAATGATCAAGGTAATAGAACAACACCTTCTTTTGTTGCTTTCACCGAAAATCAGAGATTGATCGGTGATGCTGCCAAGAATCAAGCTTCTGCCAACCCTCAAAACACCGTCTTTGATGTCAAGAGGTTAATTGGTAGGAAGTTTAGTGATCCTACTGTTCAAGATGATATACTTTTATGGCCATTCAAAGTCGTTTCTGGTGTTGACGACAGACCCATGATTATAGTTAAGTACAAAGATCAAGAGAAGCAACTCTATGCCGAAGAAGTATCATCCATGGTACTCACCAAGATGCGAGAAATTGCTGAAAAATATTTAGAATCACCAGTTAAGAATGCAGTTGTTACTGTACCAGCTTATTTTAATGATGCTCAAAGAAAAGCAACTATAGATGCGGGTGTTATTGCTGGCCTCAATGTGATGAGAGTAATGAACGAACCCACTGCCGCAGCGATTGCATATGGCCTTGACAAGAGAACTGGTTGTGTTGGAGAACGGAATATTTTAGTGTTTGATCTTGGTGGTGGCACTTTTGATGTTTCTATACTAAGTATTAAGGACAGCGTCTTCCAAGTTAAGGCCACAGCCGGAAATACTCATCTCGGGGGAGAGGACTTTGATAATAGAATGGTGAACTACTTTGTACAAGAGTTCAAGAGAAAAAACAAAGTTGACATTAGTGGGAATTCAGGAGCTTTGACGAGGCTGAGAAAGAACAAAGGCGAGATTAGTGGGAAGTACTCAAAAGCTTTGAGGAGGTTGAGAACTGTTTGTGAGAGGGCAAAAAGGTCCCTTTCTTTCCTCCTTACCGCCACTATTGAAGTAGATTCTTTATTTCAAGGCATTGACTTTTCTTCATCAATCAATAGAGCCAAATTTGAGGAAATGAATATGGACCTTTTTAATGAGTGTATGAAGATTGTTGAAAGTTGTCTAATGGATGCTAAGATGGACAAGAGCATGATAGACGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCTAAAGTACAGCAGCTATTACAGGACTTTTTCAACGGGAAGGAGTTGTGCATGAGCATCAATCCTGATGAGGCAGTCGCTTATGGGGCAGCTGTTCAGGCTGCATTGTTGAGCCAAGACGTTAAGAACGTTCCAAAGTTGGTGCTTCAGGATGTTACACCTTTGTCTCTTGGCATATCAATAGTTGGAGATATCATGAGTGTGGTGATTCCAAGGAACACTCGCATTCCTGTCAAAAATACACAACAATATTTTACCGTTGAAGATAACCAATCATATTCCTTGATTAAGATTTATGAGGGTGAGAGAACAAGAGCTAGCGACAACAGTTTGCTTGGTTCTTTTACTCTTTCTGGTCACACCCCAGCTCCTCGTGGTCACACTTACGATGTTTGTTTTTCTATAGATGAAAATGGTATTTTGACAGTTTCTGCTACGGAAAGTTCCACCGGCAAAACGAGTAAAATTACAATAACCAATCACAGAGATAGATTGTCAAGTGAGGAAATTAAAAATTTAATTCAAGAAGCTGAGGATTACCAACTTGAAGACAAGAAATTCCTAAGGAATGCCAAAGCGCTGAATGATTTGGATGACTACATTTACAAAATGAGAAATGCTTTAAAGAAAAAGGATATTAATCTAAAGCTCTCCTCTCAAGAAATTGAGACTATCAAATCTACAGTTGCTGTGATTACAAAGTTGGTTGATGAGAATAACCAAGAGGTGGAAATAGATGTTATGGAGGACCATCTAAATGGACTTAAGATTACCATGGAAGACATTTTACCAAAGACTATTTAG 1914 0.3939 MKRKQEAHSAVGIDLGTTYSCVAVWQEEHCRVEIIHNDQGNRTTPSFVAFTENQRLIGDAAKNQASANPQNTVFDVKRLIGRKFSDPTVQDDILLWPFKVVSGVDDRPMIIVKYKDQEKQLYAEEVSSMVLTKMREIAEKYLESPVKNAVVTVPAYFNDAQRKATIDAGVIAGLNVMRVMNEPTAAAIAYGLDKRTGCVGERNILVFDLGGGTFDVSILSIKDSVFQVKATAGNTHLGGEDFDNRMVNYFVQEFKRKNKVDISGNSGALTRLRKNKGEISGKYSKALRRLRTVCERAKRSLSFLLTATIEVDSLFQGIDFSSSINRAKFEEMNMDLFNECMKIVESCLMDAKMDKSMIDDVVLVGGSSRIPKVQQLLQDFFNGKELCMSINPDEAVAYGAAVQAALLSQDVKNVPKLVLQDVTPLSLGISIVGDIMSVVIPRNTRIPVKNTQQYFTVEDNQSYSLIKIYEGERTRASDNSLLGSFTLSGHTPAPRGHTYDVCFSIDENGILTVSATESSTGKTSKITITNHRDRLSSEEIKNLIQEAEDYQLEDKKFLRNAKALNDLDDYIYKMRNALKKKDINLKLSSQEIETIKSTVAVITKLVDENNQEVEIDVMEDHLNGLKITMEDILPKTI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09606 637 FunFam Heat shock protein 70 11 200 - -
Vifa1g09606 637 FunFam Heat shock protein 14 238 339 - -
Vifa1g09606 637 Coils Coil 540 560 - -
Vifa1g09606 637 FunFam heat shock 70 kDa protein-like 74 129 - -
Vifa1g09606 637 Gene3D - 195 387 - -
Vifa1g09606 637 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 413 567 IPR029047 -
Vifa1g09606 637 ProSitePatterns Heat shock hsp70 proteins family signature 3. 361 375 IPR018181 -
Vifa1g09606 637 SUPERFAMILY Actin-like ATPase domain 201 408 IPR043129 -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 496 512 - -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 390 410 - -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 416 435 - -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 39 51 - -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 61 69 - -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 358 374 - -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 9 22 - -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 149 169 - -
Vifa1g09606 637 PRINTS 70kDa heat shock protein signature 212 222 - -
Vifa1g09606 637 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 563 635 IPR029048 -
Vifa1g09606 637 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 412 563 IPR029047 -
Vifa1g09606 637 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Vifa1g09606 637 Pfam Hsp70 protein 283 623 IPR013126 GO:0005524|GO:0140662
Vifa1g09606 637 Pfam Hsp70 protein 10 275 IPR013126 GO:0005524|GO:0140662
Vifa1g09606 637 SUPERFAMILY Actin-like ATPase domain 10 194 IPR043129 -
Vifa1g09606 637 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Vifa1g09606 637 Gene3D - 11 405 - -
Vifa1g09606 637 Gene3D - 564 637 IPR029048 -
Vifa1g09606 637 FunFam Heat shock 70 kDa protein 410 563 - -
Vifa1g09606 637 Gene3D - 74 129 - -
Vifa1g09606 637 Gene3D Actin; Chain A, domain 4 238 339 - -
Vifa1g09606 637 PANTHER HEAT SHOCK PROTEIN 70KDA 10 588 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09606 Vifa-Chr1 1541083556 1541085612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09606 10 626 Calmodulin-binding Proteins AT3G12580 63.489 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09606 K03283 - gmx:102667572 881.322