Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09600 ATGGCTTCCATATGGTTCATCTTTGGTGCAATTGCTGGTGCTCTTTTGGTCCTAAGATATCTCCTCAAGCGTGTGAATTGGTTGCTCTATGAAGCAAAACTTGGTGACAAGCAATACACTTTGCCACCAGGTGACATGGGATGGCCAATAATTGGGAACATGTGGTCATTCCTTAGGGCTTTCAAGTCCAATAAACCAGATTCTTTCATGGATTCTATCGTCAAAAGGTTTGGAAACACAGGCATATACAAGGTGTTCATGTTTGGATTCCCAAGTGTAATTGTGACATCACCAGAAGCATGCAAGAAAGTTTTAACAGATGATGAAAATTTTGAACCTGGCTGGCCACAATCAACGGTCGAATTAATCGGCGAAAAATCGTTCATCAAAATGCCATTTGAAGAACATAGAAGACTTAGACGTTTAACATCGGCTTCGATCAATGGCTACGAGGCACTTTCAGTGTACTTGAAATATATTGAAGAAATTGTGATTAGTTCATTGGAAAAATGGACTCAAATGGGTGAAATTGAGTTCTTAACTCAAATGAGAAAACTCACTTTTAAGATTATTATTCATATTTTCCTTGGTTCAGAAAGTGAACCGGTTATGGAAGCTTTGGAAAGAGAATATACAGTTCTTAACCTTGGTGTTAGAGCTATGAGAATTAATATTCCTGGATTTGCTTTCCATAAATCACTTAAGGCTAGGAAAAATCTTGTGGCTATATTTCAATCAATTGTGGACAAGAGAAGAGATGAAAGGAGAGGAAAAAAACCAGTACCGGGTCAAAAAGCGAAAGATATGATGGATTCATTGATAGATGCTGTTGATGAAAATGGAAGAAAATTGGGTGATGATGAAATCATTGATATCATGTTGATGTACTTGAATGCTGGTCATGAATCTTCAGGACATATCACCATGTGGGCTACCTATTTCTTGCAAAGGCATCCTGAATTTTTCCGAAAGGCTAAGGAAGAACAAGTTGAAATGCTTAAGAGAAGGCCTCCATCACAAAAAGGGTTGAAACTAGAGGATGTTAGAAAAATGGAATATCTTTCTAAGGTGATTGATGAAACAATGAGAGTGGTTACTTTCTCGCTTATGGTCTTTCGCCAGGCGAGGGCCGATGTCAAAGTTAATGGTTACCTCATTCCAAAGGGATGGAGAGTGCTTACTTGGTTCAGATCAGTTCACTTTGACTCTGAACTTTATCCTGATCCAAGGGAGTTCAATCCTGAAAACTTTAGTGTGGTGCGAAAGGCTGGTGAGTTCCTTCCATTTGGAGCAGGAACTAGATTGTGCCCTGGCAATGATCTTGCCAAGCTGGAAATCTCAGTTTTCCTTCACCATTTCCTCCTCAAATATGAACTTGAACAGCTTAACCCAAAATCTCCCATAAGATTCTTACCACACACAAGGCCATTGGACAACTGTTTGGCAAGGATCAAGAAGCAAGCAGCTGCATGA 1473 0.3951 MASIWFIFGAIAGALLVLRYLLKRVNWLLYEAKLGDKQYTLPPGDMGWPIIGNMWSFLRAFKSNKPDSFMDSIVKRFGNTGIYKVFMFGFPSVIVTSPEACKKVLTDDENFEPGWPQSTVELIGEKSFIKMPFEEHRRLRRLTSASINGYEALSVYLKYIEEIVISSLEKWTQMGEIEFLTQMRKLTFKIIIHIFLGSESEPVMEALEREYTVLNLGVRAMRINIPGFAFHKSLKARKNLVAIFQSIVDKRRDERRGKKPVPGQKAKDMMDSLIDAVDENGRKLGDDEIIDIMLMYLNAGHESSGHITMWATYFLQRHPEFFRKAKEEQVEMLKRRPPSQKGLKLEDVRKMEYLSKVIDETMRVVTFSLMVFRQARADVKVNGYLIPKGWRVLTWFRSVHFDSELYPDPREFNPENFSVVRKAGEFLPFGAGTRLCPGNDLAKLEISVFLHHFLLKYELEQLNPKSPIRFLPHTRPLDNCLARIKKQAAA 490
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09600 490 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 Pfam Cytochrome P450 42 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 SUPERFAMILY Cytochrome P450 39 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 Gene3D Cytochrome P450 32 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vifa1g09600 490 FunFam Ent-kaurenoic acid oxidase 32 487 - -
Vifa1g09600 490 PANTHER CYTOCHROME P450 26 38 472 - -
Vifa1g09600 490 CDD CYP90-like 74 486 - -
Vifa1g09600 490 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g09600 490 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa1g09600 Vifa-Chr1 1539628852 1539631269 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09600 4 487 Cytochrome P450 AT1G05160 62.757 0.0 655
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09600 K04123 - gmx:100781238 736.487