Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g09587 ATGAAGGGTGAGAGAGCAAGAGCCAGTGACAACAATTTGCTTGGTTCTTTTACTCTTTCTGGCATTCCCCCAGTTCCTCGCGGCAGCCCTCTCTCAAATGTTTTTTTTTCTATTGATGAAAATGGTATTTTGACTGTTTCAGCTAATAATAATGTTTCTGGAGTTTCAAACAAGATTACAATAACCAATCACAGAGATAGATTGTCAAGTGAGGAAATTAAAAAATTGATTCAAGAAGCTGAGAGTTACCAAATTGAAGACAAGAAATTCCTAAGGAAAGCCAAAGCGTTGAATGCATTGGATGACTACATTTACAAAATGAGAAATGTTTTAAAGAAAAAGGATATTAGTCTAAAGCTCTCCTCTCAAGAAATTGAGATTATCGAATCTTCAATTACTGCGACTACAAATTTGATTGATGAGAATAACCTAGAGGTAGAAATAGATGTTTTGGAGGACCATCTAAAGGGACTTAAGAGTACCATAGAAGACATTTTAGCTAAGACTATTTAG 513 0.3489 MKGERARASDNNLLGSFTLSGIPPVPRGSPLSNVFFSIDENGILTVSANNNVSGVSNKITITNHRDRLSSEEIKKLIQEAESYQIEDKKFLRKAKALNALDDYIYKMRNVLKKKDISLKLSSQEIEIIESSITATTNLIDENNLEVEIDVLEDHLKGLKSTIEDILAKTI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g09587 170 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 96 IPR029047 -
Vifa1g09587 170 Pfam Hsp70 protein 1 168 IPR013126 GO:0005524|GO:0140662
Vifa1g09587 170 PANTHER HEAT SHOCK PROTEIN 70KDA 2 123 IPR013126 GO:0005524|GO:0140662
Vifa1g09587 170 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 96 169 IPR029048 -
Vifa1g09587 170 Gene3D - 97 170 IPR029048 -
Vifa1g09587 170 Coils Coil 141 168 - -
Vifa1g09587 170 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 101 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g09587 Vifa-Chr1 1536259402 1536262264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g09587 2 168 Calmodulin-binding Proteins AT3G12580 50.299 5.07e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g09587 K03283 - mtr:11443784 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g09587 1 1536259402 1536262264 Vifa1g09587 1 1536259402 1536262264 ECH